Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2228 145 1e-29 >seq2228 Length=283306 Score = 145 bits (160), Expect = 1e-29 Identities = 201/279 (72%), Gaps = 2/279 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| ||||| ||||| | ||||||| ||||| || Sbjct 200987 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCCTTCTGGACCGCCGAAGAGATCGATTTG 201046 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||| ||||| |||| ||| | ||| | | ||| ||| || | || || || Sbjct 201047 TCCAAAGACCTTCACGACTGGAATGATCGACTAAATGACGATGAACGCTACTTCATCTCT 201106 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197 || | |||||||||||||||| ||||| || ||||||||||| |||| | |||| Sbjct 201107 CATGTGTTGGCCTTCTTTGCCGCTTCCGACGGCATCGTCAACGAAAATCTTCTTGAGCGC 201166 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 || | |||| | |||||||||| ||||| ||||| ||||| |||||||| Sbjct 201167 TTTAGCGGCGAAGTTCA-GATTCCAGAGGCCCGTTGCTTCTACGGTTTCCAGATCATGAT 201225 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 |||||| | ||||| || | |||||| || ||||| Sbjct 201226 GGAGAACATCCACTCCGAGACCTACTCTTTGCTCATTGA 201264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741014264022760