Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_004681.1 Length=75931 Score E Sequences producing significant alignments: (Bits) Value seq4676 159 2e-34 seq2129 129 3e-25 >seq4676 Length=1063 Score = 159 bits (176), Expect = 2e-34 Identities = 237/333 (71%), Gaps = 5/333 (2%) Strand=Plus/Plus Query 67143 TCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGG 67202 |||||||| | ||| |||||||||| || | | |||| ||||||||||| | Sbjct 14 TCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAGCCCC---GAGACCACCACCG 70 Query 67203 GCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCG 67262 |||| || || ||| ||||||||| || || ||| |||| |||| |||| || |||| Sbjct 71 GCGGCAATGCGCTGAAGTTCTACGCGTCCGTGCGCCTGGACATCCGCCGCACCGGCACCA 130 Query 67263 AGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGC 67322 ||| | ||||| ||||| |||||||| ||| ||| || ||||||||||||||| Sbjct 131 TCAAGAAGGGCGAGGAGGCGATCGGCAACGAGACCAAGGTCAAGGTCGTCAAGAACAAGG 190 Query 67323 TGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTG 67382 |||| || ||| | | || |||||| | || ||| ||| |||||||||||||| | Sbjct 191 TGGCGCCCCCGTTCAAGACGGCGGAGTTCGACATCCTGTTCGGCGAGGGCATCTCGCGCG 250 Query 67383 AGGTCGAACTCCTCGACCTGGCCGT-GTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGG 67441 | | ||| || ||||| ||| ||| ||| || | | ||||||| ||||||||| Sbjct 251 AAGGCGAGGTCATCGACATGGGCGTCAACGC-CCGCATCATCGAGAAGTCCGGCGCCTGG 309 Query 67442 TTCAAGTACGGGGACAAGAACGTCGCTCAGGGC 67474 | | ||| || | |||| ||| |||||| Sbjct 310 TACGCCTACAAGGGCGAGAAGATCGGCCAGGGC 342 >seq2129 Length=790 Score = 129 bits (142), Expect = 3e-25 Identities = 182/256 (71%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 67196 ACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATC 67255 ||||| ||||| || || ||| |||||||| || ||||| | || || || |||||| Sbjct 790 ACCACCGGCGGCAATGCGCTGAAATTCTACGCGTCCGTCCGTCTCGACGTGCGCCGCATC 731 Query 67256 GCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAG 67315 | | | | ||||| |||| || || |||||||| ||||| ||||| || || ||| Sbjct 730 GGCTCGGTCAAGGACCGCGAGGAAGCGACCGGCAACCAGACCCGCGTGAAGGTGGTGAAG 671 Query 67316 AACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATC 67375 |||||| | || |||||| | | | ||| ||| | || ||| ||| |||||||| Sbjct 670 AACAAGGTCGCGCCGCCGTTCAAGCAGGTCGAATTCGACATCATGTTCGGTGAGGGCATT 611 Query 67376 TCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGC 67435 || || ||| || ||||||| | |||| | |||||||| ||||||||||| Sbjct 610 TCCAAGCTGGGCGAGATCATCGACCTCGGCGTGAAGGCCGGCCTGGTCGAGAAGTCGGGC 551 Query 67436 GCCTGGTTCAAGTACG 67451 ||||||||| |||| Sbjct 550 TCCTGGTTCAGCTACG 535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242840042068412