Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_004687.1 Length=156102 Score E Sequences producing significant alignments: (Bits) Value seq1432 93.3 4e-14 seq3761 86.0 6e-12 >seq1432 Length=684 Score = 93.3 bits (102), Expect = 4e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 94072 ACGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGA 94131 ||||| |||| |||| |||| ||||| ||||||||||||||||| ||||||||||||| Sbjct 119 ACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGA 60 Query 94132 ATCCTGTCACCCCGAC 94147 |||||||| |||||| Sbjct 59 ATCCTGTCTTCCCGAC 44 >seq3761 Length=1757 Score = 86.0 bits (94), Expect = 6e-12 Identities = 114/151 (75%), Gaps = 12/151 (8%) Strand=Plus/Plus Query 116615 CGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTA--CG-TCATGGGCATC-A 116670 ||||||||||||||| || | || || |||||||| |||| || ||| | || | | Sbjct 470 CGGCCCGGGCCGTGGATCAGGCGCCGGATCGCTGGTGGCCTATTCGCTCAAGATCACCGA 529 Query 116671 CCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCGC- 116729 |||||||| ||| || ||||| ||||| ||||||||||||| | |||||||| ||| Sbjct 530 CCTCGATC--CCC--TCCAGTACAACCTGCTGTTCGAGCGCTTCCTGAACCCGGAGCGCG 585 Query 116730 -CCCGACTTCCCCGACATCGACGTCGACTTC 116759 ||| | || ||| ||||| |||||||| Sbjct 586 TGTCGA--TGCCGGACTTCGACATCGACTTC 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499368117729520