Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_004688.1
Length=110865
Score E
Sequences producing significant alignments: (Bits) Value
seq2797 109 4e-19
seq1359 82.4 5e-11
>seq2797
Length=1861
Score = 109 bits (120), Expect = 4e-19
Identities = 127/169 (75%), Gaps = 7/169 (4%)
Strand=Plus/Plus
Query 99393 CTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAAT 99452
|||||| ||||| || | ||| || || || |||||||| |||||||||| || || ||
Sbjct 691 CTTGATCAGGCCGGTGATCACGTCGACCGAAGGCCGCTGGGTCGCCAGGATCAGGTGGAT 750
Query 99453 GCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCTTGTA 99512
|||||| || |||||||||||||| | ||| | ||| | || | | ||||||
Sbjct 751 GCCGGCGGCGCGCGCCTTCTGCGCCAGGCGAGCGATGAGCTCTTCGATC---TTCTTG-- 805
Query 99513 GCCAC--CCATCATGAGATCAGCGAGTTCATCCACCACTACCACGATGT 99559
|||| ||||||| || || |||||||| || | ||| ||||||||||
Sbjct 806 CCCACCACCATCATCAGGTCGGCGAGTTCGTCGATCACCACCACGATGT 854
Score = 82.4 bits (90), Expect = 5e-11
Identities = 97/129 (75%), Gaps = 2/129 (2%)
Strand=Plus/Plus
Query 99774 GTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCTGGACTTGCCCGATCCGGTCGCGCC 99833
||| |||||||| | | ||| | ||||||| | |||||||| |||||||| | |||
Sbjct 1156 GTAAAGCAGCGACAGGATCATCGCGTTGATGCCGACCGACTTGCCGGATCCGGTGGTGCC 1215
Query 99834 AGCCACCAGCAGATGCGGCATCTTAGCCAGGTTCAGGGA-GATGTCCTTGCCCTCGACGT 99892
|||||||||| ||||||||||| |||||| || | | || ||||| ||| ||
Sbjct 1216 GGCCACCAGCACGTGCGGCATCTTGGCCAGG-TCGGCCACGACAGGATTGCCGACGATGT 1274
Query 99893 CCTTGCCCA 99901
|||||||||
Sbjct 1275 CCTTGCCCA 1283
>seq1359
Length=2077
Score = 82.4 bits (90), Expect = 5e-11
Identities = 72/90 (80%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 99393 CTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAAT 99452
|||||| | ||| || | || || || ||||| ||||||||||||| || ||| || ||
Sbjct 1841 CTTGATCACGCCGGTGATGACGTCGACCGAGGGGCGCTGCGTCGCCATGATGAGGTGGAT 1900
Query 99453 GCCGGCCGCACGCGCCTTCTGCGCGATGCG 99482
||| ||||| |||||||| ||||||| |||
Sbjct 1901 GCCCGCCGCGCGCGCCTTTTGCGCGAGGCG 1930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354622232939886
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |