Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_005345.2 Length=49220 Score E Sequences producing significant alignments: (Bits) Value seq4430 197 4e-46 >seq4430 Length=945 Score = 197 bits (218), Expect = 4e-46 Identities = 381/549 (69%), Gaps = 20/549 (4%) Strand=Plus/Minus Query 45999 TCGCCGGGTACGACATCCCTCAGGGCTCGCCGACCCGGCACCCCGACGAGCTCGCCGACG 46058 ||||||| ||||||||| | |||| | ||||||| || | | || | ||| | |||| Sbjct 558 TCGCCGGCTACGACATCGCCCAGGCCCCGCCGACGCGCCCGCTCGCCCTGCT-GAAGACG 500 Query 46059 -CCGTCGGCACGGCTGTGCAGTGGCGCCTCGGCGCGAAGTATGGCCGGATCGCCGCCATC 46117 |||||| | | | || | ||| | ||||| |||| | ||| |||||| || | Sbjct 499 GCCGTCGCCGCATCAGTCGACCTCCGCGTTGGCGCCCAGTACGCCCGCATCGCC--CAGC 442 Query 46118 ATTCCCAGTG--TCCTCGCCGACACGATC-CGCTACGTCCACACCGCCCCCGCAAGCGAG 46174 | ||| | ||||| | ||| || || ||| || ||||| || |||| || | Sbjct 441 AGGCCCCGGCCCTCCTCACGGACGCGCTCGCGC-ACCTCCACCAGGCGCCCGGCCCCG-G 384 Query 46175 CATGCTGCCGCCGCCCGGCTACTGGCCTCGGCCGCCCGTACCGCCGACGCTATCGCCTAC 46234 || | || ||| || ||| || ||||| || | |||||||| |||||||| Sbjct 383 CACGGCGC----GCCTGG----TGGTGTCCGCCGCGCGCTCAGCCGACGCCGTCGCCTAC 332 Query 46235 AAGTACGGCGCGAACGACCTTTCCGCCCGGTTGATCGACGTCCTGCGTTGGGCCGCTGCC 46294 ||| ||||||| ||||||| |||||||| | ||||| || |||| |||||| | ||| Sbjct 331 AAGAGCGGCGCGCACGACCTATCCGCCCGCCTCGTCGACCTCATGCGCTGGGCCTCCGCC 272 Query 46295 CGGTCCGCCGATCCGCTCGTCGAGGCCACCGCCGCGTATGTGCGCACAGAAACGTTCTTC 46354 || ||| || || ||||| || |||||| || || || ||||| || || |||||| Sbjct 271 TGGGCCGAGGACCCCCTCGTGGACTCCACCGTGGCCTACGTCCGCACCGAGACCTTCTTC 212 Query 46355 GCCGCCCGAGCGCACGCTGTCGGCCTCGCG-GCGCTGGAGCAGGCGATCGAGCGCACGCC 46413 ||||| || |||||| | |||||| ||| || || ||| || |||| | | | Sbjct 211 GCCGCGCGCGCGCACCGCGCCGGCCT-GCGCGCCCTCGAGACCGCCCTCGACGGTGCATC 153 Query 46414 GGCGCCGACAAGCCGTACCGAGGCCGCCGCGCGTGGCGCGCTCCACATGCGGGCCGCTGT 46473 |||||||| |||| ||| | || | || ||||| ||||||||| |||| || || Sbjct 152 AGCGCCGACGAGCCCGGTCGACACAGCAGTCCGCGGCGCCCTCCACATGAGGGCTGCCGT 93 Query 46474 CATCGCCGGGCGGGCGGGAGACATCGGCGCCGCCGACACCCACATCGACAACGCCCGCGG 46533 ||||||||| || || |||| || |||||| || | ||| ||| | | |||||| | Sbjct 92 CATCGCCGGCCGTGCCACCGACACCGCCGCCGCGTACGCGCACCTCGGCGAGGCCCGCAG 33 Query 46534 CCTC-GCCG 46541 |||| |||| Sbjct 32 CCTCAGCCG 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157373333888484