Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3060 111 1e-19 >seq3060 Length=205498 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||||||||||| || | ||| ||||| | ||| | ||| || Sbjct 122342 ACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCTTCA 122283 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 |||||||| || | ||||| || | |||||| || ||||| || || || ||||| | Sbjct 122282 AGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATTCCCTCCTTGTCTTGG 122223 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || |||| ||| || | ||| ||| ||| || || || |||| |||||||| || Sbjct 122222 ATCTTTGTCTTCACATTGTCGATAGTATCACCGGACTCAACCTCAAGGGTGATGGTCTTG 122163 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| | ||| || ||||| |||||||| Sbjct 122162 CCAGTCAAAGTCTTGACAAAAATCTGCAT 122134 Score = 105 bits (116), Expect = 6e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || | ||||| ||| ||||| |||| ||| |||||| || | |||||||||| Sbjct 123108 CCGCCGCGCAATCTCAATACCAAATGCAGAGTGCTTTCCTTCTGGATGTTATAATCGG-- 123051 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | ||||| || |||||| ||||| ||||| ||||||| | || || || || || | Sbjct 123050 AGAGTGTCCGACCATCCTCAAGCTGCTTTCCAGCAAAGATGAGTCGCTGTTGGTCGGGTG 122991 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | ||||||||||| || | |||||| | ||| ||| | ||| ||||| | |||| Sbjct 122990 GGATACCTTCTTTATCTTGAATTTTCGTCTTAACGTTGTCGATCGTGTCTGACGACTCGA 122931 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || || || || || || | || || ||||| || ||||| Sbjct 122930 CCTCCAATGTAATAGTCTTGCCGGTTAATGTCTTAACAAAAATTTGCAT 122882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448264016742360