Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1554 104 4e-18
seq505 104 4e-18
>seq1554
Length=80044
Score = 104 bits (114), Expect = 4e-18
Identities = 84/99 (85%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| |||||| || |||||||| ||||| || ||||| |||||
Sbjct 26431 GCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATCCAGGGAATAACAAAGCCTGCTAT 26489
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
||||||||| ||||| |||||||| ||||||||| ||||
Sbjct 26490 CCGTCGTCTTGCTCGCCGTGGTGGTGTCAAGCGTATCTC 26528
Score = 87.8 bits (96), Expect = 3e-13
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| ||||||| || | || ||| ||||||| |||||| | ||||| | ||||
Sbjct 26593 TGATCTATGAGGAAACCCGAACTGTCTTGAAGACTTTCCTCGAAGGTGTTATTCGCGATG 26652
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || || || |||||||| || | |||||||| || || ||||| |||||||||
Sbjct 26653 CCGTCACATACACTGAGCACGCCAAGAGAAAGACTGTAACATCTCTGGATGTCGTCTATG 26712
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTA 16683
| ||||||||||||| ||| || ||||
Sbjct 26713 CCCTGAAACGTCAAGGACGTGAGTTTTA 26740
>seq505
Length=480567
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| ||||||| ||||| | || || |||||||| || ||||||||||| |||||
Sbjct 85569 GCCAAGCGCCATCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCTGCTAT 85511
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|| ||||| ||||||||||| || ||||||||| ||||||
Sbjct 85510 TCGCCGTCTTGCTCGTCGTGGCGGTGTCAAGCGTATCTCTG 85470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79070764696743
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |