Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3934 223 9e-53 >seq3934 Length=413549 Score = 223 bits (246), Expect = 9e-53 Identities = 1096/1742 (63%), Gaps = 88/1742 (5%) Strand=Plus/Minus Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449 |||||||| || || | |||| || || || | || |||||||| | | | ||| Sbjct 409413 TTTCGGATTCAAAACTTTAGAGAGGTCATATCTGTTGCGAATCAATGGCAAGGTCGCTGA 409354 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 || ||||| || ||| | ||||||||||| |||| || ||| || || |||| Sbjct 409353 GCGTCCGCAACACATGATTATGCGTGTTGCGGTTGGCATTCATGGCGAAGACATTGAGAA 409294 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTAT---TCACGCACGCCACGCCAAC 363566 ||||| ||||| ||||| || | || ||| || | || || || | || || Sbjct 409293 GGCGATCGAAACGTATAATCTGAT--GT-CTCAGAAATATTTTACACATGCTTCCCCCAC 409237 Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626 | | ||| || ||||| | | ||||||||| | || || ||||| | | ||||| Sbjct 409236 TCTTTTCAACGCGGGAACACCGCAACCACAGATGGCCTCCTGTTTTCTCATTGATATGAA 409177 Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686 ||| ||| |||||| ||||||| || || || |||| || ||||| |||||||||| Sbjct 409176 GGAAGATAGCATCGATGGTATCTACGATACTCTAAAGACCTGCGCTCTGATTTCCAAGAC 409117 Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCG 363745 || ||||| || ||| | ||||| | |||| || || | | |||||| | Sbjct 409116 AGCTGGCGGTATCGGTCTTAATATCCATCGTATTCGCGCGACTGG-CTCCTACATTGCAG 409058 Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805 | ||| || | ||| || || | || |||||||| ||||| ||| ||||||| || Sbjct 409057 GAACAAACGGCTCCTCTAACGGAATCGTCCCCATGCTCCGTGTCTTTAACAATACAGCTC 408998 Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865 | || |||||||| ||||| || || || || ||||| || ||||| || ||| Sbjct 408997 GATATGTCGACCAAGGTGGCAACAAACGGCCTGGCGCCTTTGCCATTTATCTTGAACCTT 408938 Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925 || ||||||| || |||||| | || ||||| |||||| ||||| |||||| | Sbjct 408937 GGCACTCCGATATCTTCGAGTTTTTAGATCTCCGTAAAAACCACGGAAAGGAGGAAGTAA 408878 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985 | || |||||||| ||| ||| |||||| | || | || |||||||| || ||| Sbjct 408877 GAGCCCGTGATCTCTTCCTTGCTCTTTGGACCCCCGATCTGTTCATGAAGCGGGTTGAG- 408819 Query 363986 CAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043 | | | | ||||| | | ||||| ||| ||||| |||| | | || || | Sbjct 408818 -AAGAACGGCGATTGGACCTTGTTTTGTCCAAACGAAGCGTCAGGATTAGCTGACGTTTA 408760 Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGT---------------------------- 364075 ||||| || | | || || || ||| ||| Sbjct 408759 CGGTGATGAATTCGAGGCCCTCTATGAACAGTGAGTCCATCATCCAAAGCAAGACCAATT 408700 Query 364076 ----------ATGAAT---------CG-GAGGGAAAGGCTCGT----AAGACAATTCCCG 364111 || ||| || ||||||| | | || ||||| || | Sbjct 408699 GATACTAACAATCAATTTGCAGGTACGAGAGGGAAGGTCGCGGCCGAAAGACTATCAAGG 408640 Query 364112 CACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGT 364171 | || || || |||| ||| || |||| | || | ||||| || | |||| ||| Sbjct 408639 CTCAAAAACTTTGGTATGCTATTTTGGAGGCTCAAACAGAGACTGGGAACCCCTTCATGC 408580 Query 364172 TGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGA 364231 | || |||||| |||||||||||||| ||||| | ||||||| || |||| | Sbjct 408579 TTTATAAAGATGCGTGCAACCGCAAGAGTAACCAAAAAAACCTTGGAACTATTCGGAGCT 408520 Query 364232 GCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACC 364291 |||| | || || || || || || |||||||| || ||||| || || || || Sbjct 408519 CCAACTTGTGCACGGAAATCATCGAGTACACCGCGCCGGACGAAGTCGCAGTTTGCAATT 408460 Query 364292 TTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATG------GTACTTTTGACCACCAGC 364345 | ||||| | || | || | | ||| | || | | |||| | Sbjct 408459 TGGCGTCCCTTGCTTTGCCCACATATGTCGATCCTGTCCGGGGCGAGTATGACTTTGGGA 408400 Query 364346 ATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAA 364403 | |||| || || | || | | || ||| | ||||| | || ||||| || Sbjct 408399 GATTGCATGAAGTCACACAAGTCCTTGTTCT--CAACTTAAACAAGATCATTGACAACAA 408342 Query 364404 TTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGG 364463 | | ||||| | || |||||| | ||| | |||||||| || |||| | || Sbjct 408341 TCACTATCCCGTCCCAGAAGCCAGGAAGAGTAACTTCCGTCATCGTCCTATTGCGGTGGG 408282 Query 364464 TGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGC 364523 ||| ||||| |||||||| | ||| | ||| || | ||||| |||||||| || Sbjct 408281 TGTGCAGGGACTCGCTGATGCTTTCCTTGCGCTGCGATTGCCGTTTGACTCGCCTGAGGC 408222 Query 364524 TCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTG 364583 | |||| | ||||| |||||||| || ||| || |||| || || || Sbjct 408221 AAAGCAGTTGAATATTCAAATCTTCGAAACAATCTACCATGCAGCTCTGACCGCGTCTTG 408162 Query 364584 TGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGG 364643 ||| | || || | || || |||||||| || || || |||| |||| Sbjct 408161 TGACATAGCCAAGGTTGATGGTCCTTATGAAACTTATGAAGGTTCTCCCGTTTCAAAGGG 408102 Query 364644 AAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT 364703 | || |||| ||| | ||||| || || || ||| || ||| ||||||| || || Sbjct 408101 TACTTTGCAGTACGATATGTGGAACGTGACTCCGACTGACCTTTGGGACTGGGACACCCT 408042 Query 364704 -ACGTTCCAACGTTAAG---AAGCATGGTACTCGCAAC---TCCCTCGTTACAGCGCCCA 364756 | | || | || || || ||| |||||| | || ||| || || | Sbjct 408041 CAAG----AAGGATATCGCAAAACACGGTGTACGCAACAGTTTACTTGTT---GCTCCGA 407989 Query 364757 TGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAA 364816 |||| || || || ||||||||||| |||||| || || || || | ||| Sbjct 407988 TGCCTACTGCCAGCACGAGTCAGATCCTCGGTTTCAACGAATGTTTTGAGCCATACACAT 407929 Query 364817 GCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAG 364876 || | || || |||||||||||| | || ||||| | || || ||| | || Sbjct 407928 CAAACATCTACTCTCGCCGGGTTCTTGCAGGCGAATTCCAAGTCGTCAATCCATGGCTTC 407869 Query 364877 TCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCG 364936 ||||||||||| || | ||| || ||| |||| |||||||||| || || || | Sbjct 407868 TCAAGGATCTTGTTGATCTCGGCCTCTGGTCAGACAACATGAAGAACCGCATTATTGCTG 407809 Query 364937 CTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAA 364996 ||||| || |||||||| || | || | ||| | || || | ||||| | Sbjct 407808 ACGGCGGTTCAGTCCAGAACATCCCCAATATCCCTGCAGACATCAAAGCTCTCTACAAGA 407749 Query 364997 CCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTA 365056 | || |||||||| ||| | || ||||| | ||||| || || || || || || | Sbjct 407748 CAGTGTGGGAAATCTCCCAAAGGACCATCATTCAGATGGCTGCTGACCGGGGCGCATTCA 407689 Query 365057 TC 365058 || Sbjct 407688 TC 407687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303272592093482