Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2228 197 3e-45 >seq2228 Length=283306 Score = 197 bits (218), Expect = 3e-45 Identities = 319/447 (71%), Gaps = 15/447 (3%) Strand=Plus/Plus Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 ||||| |||||| | ||||| || || ||||||||| ||| | ||||| || || ||| Sbjct 201461 CTGGTTGCCTTTGCAGCCGTTGAAGGTATCTTCTTCAGTGGCTCTTTCGCTTCTATTTTC 201520 Query 42765 TGGCTCAAGCAGAAGGTGTCG--ATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822 ||| | ||| | | ||| | |||||||| ||||| || ||||| ||| | || | Sbjct 201521 TGGTTGAAGAA--ACGTGGCCTTATGCCCGGTCTCACTTTTTCGAATGAATTGATTTCCC 201578 Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACA 42882 | |||||||| || || | ||||||||||||||||| ||||| ||||||| | || Sbjct 201579 GTGACGAGGGTCTCCACACCGACTTTGCCTGCCTCCTCTTCTC---CCACCTCCGCCA-T 201634 Query 42883 AGCCCTCGAAGGAGCGG--GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGA 42940 |||| || ||| || |||||||||||| ||||| || ||||| |||||||| Sbjct 201635 CGCCC-CGGCCCTTCGGCCGTTGAGGCCATCATCACAGAGGCAGTTGAGATTGAGAAGGA 201693 Query 42941 GTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCA 42999 ||| | || | | || || ||| |||| | ||||||||| | | ||||||||| Sbjct 201694 ATTCTTAACTGATGCTCTTCCATGTG-CCCTTCTTGGCATGAACGCCAAGCTCATGTGCC 201752 Query 43000 AGTACATCCAGTACGTCGCCGACCATCT-CCTGTGCCAGATGGGTCTCAGCCGCCTCTAC 43058 | || ||| ||| || |||||| || | ||| | |||| || ||||| Sbjct 201753 AATATATCGAGTTTGTTGCCGACAGACTGCTTGTTGC-TTTGGGCAACAAAAAGTTCTAC 201811 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 || | | ||| || ||||||||||| ||||||||||||| |||||||||||||| Sbjct 201812 AATGCCACCAACCCATTTGACTTTATGGATAACATCTCGTTGGCCGGCAAGACCAACTTC 201871 Query 43119 TTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||||| || | || |||||| Sbjct 201872 TTCGAGAAGCGGGTTGGTGATTACCAG 201898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944281937631760