Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq4676 154 7e-33 seq2129 105 3e-18 >seq4676 Length=1063 Score = 154 bits (170), Expect = 7e-33 Identities = 205/285 (72%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 66417 GAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGC 66476 |||||||||||||| || || || ||| |||||||| || ||||| |||| ||||| Sbjct 58 GAGACCACCACCGGCGGCAATGCGCTGAAGTTCTACGCGTCCGTGCGCCTGGACATCCGC 117 Query 66477 AGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTT 66536 | | || |||| ||| | ||||| ||||| |||||||| || || ||||| Sbjct 118 CGCACCGGCACCATCAAGAAGGGCGAGGAGGCGATCGGCAACGAGACCAAGGTCAAGGTC 177 Query 66537 GTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAG 66596 |||||||||||| ||||||| ||| | ||| ||||| |||| | | ||||||| Sbjct 178 GTCAAGAACAAGGTGGCGCCCCCGTTCAAGACGGCGGAGTTCGACATCCTGTTCGGCGAG 237 Query 66597 GGCATTTCCCGCGAGGCTGAACTCCTCGACATGGCCGTTTCCCGAGGGCTCATCAAGAAG 66656 ||||| || ||||| | || || ||||||||| ||| | | ||||| ||||| Sbjct 238 GGCATCTCGCGCGAAGGCGAGGTCATCGACATGGGCGTCAACGCCCGCATCATCGAGAAG 297 Query 66657 TCTGGGGCCTGGTTCAAGTACGGGGACAAGAACATCGGCCAGGGC 66701 || || ||||||| | ||| || | |||| |||||||||||| Sbjct 298 TCCGGCGCCTGGTACGCCTACAAGGGCGAGAAGATCGGCCAGGGC 342 >seq2129 Length=790 Score = 105 bits (116), Expect = 3e-18 Identities = 179/257 (70%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 66423 ACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATC 66482 |||||||| || || || ||| |||||||| || || ||| | || || ||| | ||| Sbjct 790 ACCACCGGCGGCAATGCGCTGAAATTCTACGCGTCCGTCCGTCTCGACGTGCGCCGCATC 731 Query 66483 GCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAG 66542 | | | | ||||| |||| || || |||||||| || ||||||||||| || ||| Sbjct 730 GGCTCGGTCAAGGACCGCGAGGAAGCGACCGGCAACCAGACCCGCGTGAAGGTGGTGAAG 671 Query 66543 AACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATT 66602 |||||| | ||||| ||| | |||| || || |||| | | ||| ||||||||| Sbjct 670 AACAAGGTCGCGCCGCCGTTCAAGCAGGTCGAATTCGACATCATGTTCGGTGAGGGCATT 611 Query 66603 TCC-CGCGAGGCTGAACTCCTCGACATGGCCGTTTCCCGAGGGCTCATCAAGAAGTCTGG 66661 ||| || ||| || || ||||| | | ||| || || || ||||||| || Sbjct 610 TCCAAGCTGGGC-GAGATCATCGACCTCGGCGTGAAGGCCGGCCTGGTCGAGAAGTCGGG 552 Query 66662 GGCCTGGTTCAAGTACG 66678 ||||||||| |||| Sbjct 551 CTCCTGGTTCAGCTACG 535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242456064771092