Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3934 104 2e-17 >seq3934 Length=413549 Score = 104 bits (114), Expect = 2e-17 Identities = 302/463 (65%), Gaps = 4/463 (1%) Strand=Plus/Minus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || || ||||||||||| || ||| ||||||||| | || ||||| || || Sbjct 409243 CCCCCACTCTTTTCAACGCGGGAACACCGCAACCACAGATGGCCTCCTGTTTTCTCATTG 409184 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | |||| || |||| || || | ||| | || ||| ||| || || | Sbjct 409183 ATATGAAGGAAGATAGCATCGATGGTATCTACGATACTCTAAAGACCTGCGCTCTGATTT 409124 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTA 94073 | || || || || ||||| | | | |||| |||| || || | || ||||| Sbjct 409123 CCAAGACAGCTGGCGGTATCGGTCTTAATATCCA--TCGTATTCGCGCGACTGGCTCCTA 409066 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| || || || ||| |||| ||||| ||||||| |||||||| ||||| ||||| Sbjct 409065 CATTGCAGGAACAAACGGCTCCTCTAACGGAATCGTCCCCATGCTCCGTGTCTTTAACAA 409006 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | || || || || ||||| ||||| | || || | || || | ||||| Sbjct 409005 TACAGCTCGATATGTCGACCAAGGTGGCAACAAACGGCCTGGCGCCTTTGCCATTTATCT 408946 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 || || |||||| | || | | || | || || || || |||||||| || || Sbjct 408945 TGAACCTTGGCACTCCGATATCTTCGAGTTTTTAGATCTCCGTAAAAACCACGGAAAGGA 408886 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 | || ||| | || |||||| ||||| ||| || || || || ||||| || Sbjct 408885 GGAAGTAAGAGCCCGTGATCTCTTCCTTGCTCTTTGGACCCCCGATCTGTTCATGAAGCG 408826 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356 || ||||| ||| || |||| | |||||||| || ||| Sbjct 408825 GGTTGAGAAGAACGGCGATTGGACCTTGTTTTGTCCAAACGAA 408783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494693201221960