Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_011287.1 Length=58554 Score E Sequences producing significant alignments: (Bits) Value seq4176 244 4e-60 >seq4176 Length=744 Score = 244 bits (270), Expect = 4e-60 Identities = 292/388 (75%), Gaps = 20/388 (5%) Strand=Plus/Plus Query 43132 CCGTTCTCGAACCACTACGAATACACGCCGAGCTACAACGACTTCGGCCACACCGACGAC 43191 |||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 3 CCGTTCAGCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGAT 62 Query 43192 AACGCCCATTTCTGGGCCCAGATGGACTACCTCACGCCGCAACTGCTGCGGGTCCTCGCT 43251 ||| ||||||| || |||||||| | || |||||| | ||||| || | || || Sbjct 63 GACGGGCATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCG 122 Query 43252 CCTGGCCGGATCTATGCCTG---CCACGTCAAGGACCGCATCTTGTTCGGCAACGTCACC 43308 || |||||| || ||||| |||||| |||||||| ||| ||||||| || ||| Sbjct 123 CCGGGCCGGCTC---GCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACC 179 Query 43309 GGCGCAGGCGTCCCCACCGTCTCCCCGTTCCACGCCGAGGCGATCTTTCAC---GGCCGC 43365 |||| || || || |||||| |||||||||||| || ||| ||| ||| Sbjct 180 GGCGAGGGTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC 239 Query 43366 AAACACGGCTTCGACTACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAAC 43425 ||||||||| | | | | |||||||||||||| |||||||| || ||||| || ||| Sbjct 240 ---CACGGCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAAC 296 Query 43426 AACCAGACGTACCGGCTGGGCTGGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGG 43481 |||||||| ||||| ||| | || | ||| || ||| || |||| ||| |||||||| Sbjct 297 AACCAGACCTACCGCCTG---TCGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGG 352 Query 43482 CGTTGGCTCCCCGGAATACGTTCTGCTG 43509 | ||| ||| |||||||| |||||| Sbjct 353 CTGCGGCAGCCCCGAATACGTGCTGCTG 380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187240413277592