Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq3060 104 2e-17 seq4836 89.7 4e-13 >seq3060 Length=205498 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || ||||||||||| || || || ||||||||||| ||| | | | ||||| Sbjct 122343 AACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCTTC 122284 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | ||||| |||||| | ||||| || || ||||| || ||||| |||||||| Sbjct 122283 AAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATTCCCTCCTTGTCTTG 122224 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 || || | || ||| | || |||||||| | || || || | ||| ||||| || Sbjct 122223 GATCTTTGTCTTCACATTGTCGATAGTATCACCGGACTCAACCTCAAGGGTGATGGTCTT 122164 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || |||| ||| || |||||||| ||||| Sbjct 122163 GCCAGTCAAAGTCTTGACAAAAATCTGCAT 122134 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || || | | || | ||| || ||||| ||||| || |||||||| || Sbjct 122880 CCACCGCGTAAGCGAAGGACGAGATGCAGTGTAGACTCTTTCTGAATGTTGTAGTCTGAT 122821 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | |||||||| || | ||||||||||| ||||| |||| Sbjct 122820 AGCGTGCGACCGTCCTCGAGCTGTTTGCCGGCAAAAATCAAACGCTGCTGGTCTGGTGGA 122761 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||| |||||||| ||| || |||| || | || || || || | ||||| Sbjct 122760 ATTCCCTCCTTGTCTTGAATCTTAGTTTTGACGTTGTCGATTGTGTCTGAAGACTCTACT 122701 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || || ||||| || |||| || || |||||||| |||||| Sbjct 122700 TCAAGCGTGATTGTTTTTCCGGTCAAGGTCTTCACAAAAATCTGCATA 122653 >seq4836 Length=199183 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 14989 TTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATC 15048 ||||| || ||||||||||| | | | | |||| || | || || |||||| | ||| Sbjct 162947 TTTTGGATATTGTAATCGCTCAAAGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAAATC 162888 Query 15049 AAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCT 15108 |||||||| ||||| ||||| ||||||||||| |||||||| || ||| | || Sbjct 162887 AAACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATTTTGCTCTTCACATTGTCG 162828 Query 15109 ATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAA 15167 || || ||||| || || || | ||| || || || || || || || || || || Sbjct 162827 ATCGTGTCGCTGGACTCCACTTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGAA 162769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357370870426535