Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq1221 129 1e-25 >seq1221 Length=9013 Score = 129 bits (142), Expect = 1e-25 Identities = 253/371 (68%), Gaps = 5/371 (1%) Strand=Plus/Minus Query 8762 GCGGCCGGCTCGGGATGATTGTCGTTGACTACCTGCAGCTGATGTCGGGTGACGGCGGCG 8821 ||||| ||| || |||| || || |||||||||||||| ||| | ||| | ||| Sbjct 381 GCGGCAAGCTGGGCCTGATCGTGGTGGACTACCTGCAGCTCATGA-GCGTGTCCTCGGGC 323 Query 8822 --GATCT--GAAATGCGGGCCACCGAGGTCGCCGAAATATCGCGCGCACTCAAACAAATT 8877 || | || | || ||||||| ||| | ||| || || || | || || | Sbjct 322 ATGAGCGACGAGAACCGCGCCACCGCGGTGGGCGAGATCTCCCGTGGCCTGAAGGCGCTG 263 Query 8878 GCGAAGGAACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAAT 8937 || |||||||| | | ||| | ||||||||||||||||| || || | ||| Sbjct 262 GCCAAGGAACTGGGCTGCCCGGTGATCGCGCTGTCGCAGCTGTCACGCGGCGTGGAGTCG 203 Query 8938 CGCCCAAACAAGCGGCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGAT 8997 ||| | ||||||| || | ||| ||| |||||||| ||||| || ||||||||||| Sbjct 202 CGCACCGACAAGCGCCCGATGATGAGCGACCTGCGCGAATCGGGCGCCATCGAGCAGGAC 143 Query 8998 GCCGACGTGATCCTCTTTATCTACCGCGATGAGGTCTATAACCCCGACAGCGCAGATCGC 9057 |||||||| ||| | || ||||||||||| || ||| ||| ||| | || | | Sbjct 142 GCCGACGTCATCATGTTCATCTACCGCGACGACTACTACAACAAGGACTCCAAGGAGCCC 83 Query 9058 GGTACGGCCGAAATCATCATTGCGAAGCAGCGAAACGGGCCGATTGGCACCGTACGGCTC 9117 || |||||| | ||||| |||||||| || || || | || ||||| ||| Sbjct 82 GGCGTGGCCGAGGTGATCATCAGCAAGCAGCGGAATGGCCCCACCGGGACCGTCAAGCTG 23 Query 9118 GCATTCCAGAA 9128 || |||| ||| Sbjct 22 GCCTTCCTGAA 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127538252655996