Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2228 147 2e-30
seq3060 100 3e-16
>seq2228
Length=283306
Score = 147 bits (162), Expect = 2e-30
Identities = 184/249 (74%), Gaps = 5/249 (2%)
Strand=Plus/Minus
Query 133195 TCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACC 133254
|| ||||| | ||||||||| ||| || || ||||| ||||| || ||||| | |
Sbjct 201243 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGGGCCTCTGGAATC 201184
Query 133255 TGCACTTCTTGAGCGAAA-CGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGC 133313
|| ||||| || ||| ||||| | |||||||||||||||||||||||| |||||
Sbjct 201183 TGAACTTCGCC-GCTAAAGCGCTCAAGAAGATTTTCGTTGACGATGCCGTCGGAAGCGGC 201125
Query 133314 GAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC---CCA 133370
|| ||||||| ||| || |||||| | ||| || | ||| || | || || |||
Sbjct 201124 AAAGAAGGCCAACACATGAGAGATGAAGTAGCGTTCATCGTCATTTAGTCGATCATTCCA 201065
Query 133371 GTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTT 133430
|||| | ||| ||||||| || | ||| ||| ||||||| || ||||||||||| ||
Sbjct 201064 GTCGTGAAGGTCTTTGGACAAATCGATCTCTTCGGCGGTCCAGAAGGACGCCTCGGCCTT 201005
Query 133431 TTTGTACAT 133439
||||||||
Sbjct 201004 CTTGTACAT 200996
>seq3060
Length=205498
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || | || ||||| || || || | || |||||| | |
Sbjct 122882 ATGCAAATTTTTGTTAAGACATTAACCGGCAAGACTATTACATTGGAGGTCGAGTCGTCA 122941
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| |||| ||||| | || ||||| || || || |||||||
Sbjct 122942 GACACGATCGACAACG-TTAAGACGAAAATTCAAGATAAAGAAGGTATCCCACCCGACCA 123000
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| ||||| | || || || ||||| || || | || || ||| ||| || ||
Sbjct 123001 ACAGCGACTCATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGGACACTCTCCGATTATAA 123060
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| |||||| || ||||||||||| || | ||| | ||||||
Sbjct 123061 CATCCAGAAGGAAAGCACTCTGCATTTGGTATTGAGATTGCGCGGCGGC 123109
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || | || || ||||| ||||| | || || ||| | |
Sbjct 122654 ATGCAGATTTTTGTGAAGACCTTGACCGGAAAAACAATCACGCTTGAAGTAGAGTCTTCA 122713
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | ||| || || | ||||| ||||||||||| | |||||
Sbjct 122714 GACACAATCGACAACG-TCAAAACTAAGATTCAAGACAAGGAGGGAATTCCACCAGACCA 122772
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | |||| || ||||||||||| || |||| ||||| || ||||||||
Sbjct 122773 GCAGCGTTTGATTTTTGCCGGCAAACAGCTCGAGGACGGTCGCACGCTATCAGACTACAA 122832
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461
||| || || || | || |||||| | || || || ||
Sbjct 122833 CATTCAGAAAGAGTCTACACTGCATCTCGTCCTTCGCTT 122871
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/218 (69%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313
|||| || || |||||||| || || ||||| |||| || || || |||| | | |
Sbjct 122436 TCGTCAAGACTCTCACGGGAAAGACTATCACTCTCGAGGTTGAATCCTCCGATACCATCG 122495
Query 38314 A-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| |||| | ||| || || | || || ||||| || || | || || || || |
Sbjct 122496 ATAACG-TGAAAACCAAGATTCAGGATAAGGAGGGCATCCCTCCAGATCAGCAACGCTTG 122554
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|||| ||| |||||||| || || || | ||||| ||| || || ||||||||||||
Sbjct 122555 ATTTTCGCTGGCAAACAACTTGAGGATGGTCGCACTCTCTCTGATTATAACATCCAAAAG 122614
Query 38433 GAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| | || || ||| | || || ||| | |||| ||
Sbjct 122615 GAATCTACTCTCCATCTTGTCCTCCGTCTCCGAGGTGG 122652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500142470771840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |