Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq650 156 3e-32 seq4720 87.8 1e-11 >seq650 Length=49892 Score = 156 bits (172), Expect = 3e-32 Identities = 878/1387 (63%), Gaps = 19/1387 (1%) Strand=Plus/Minus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| |||||||| | ||| || ||||| ||||| ||||| || || | | ||||| Sbjct 4896 ATACCGTTGGCATCGACATCGAAAGTGACCTCAATCTGAGGAACACCACGTGGGGCAGGA 4837 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 || || || | | ||| | || || || || || || ||| | |||||| Sbjct 4836 GGAATGCCAGTAAGTTCGAATTTACCGAGCAAGTTGTTGTCCTTGGTGCGGGTACGTTCA 4777 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT- 517452 || ||| | | || || || ||| || || || | |||| | || | ||| Sbjct 4776 CCTTCGTACACCTGAATCAAGACACCAGGCTGGTTGTCCGCGAAAGTAGAGAA-AGTCTC 4718 Query 517453 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 ||| || || || || || ||||| | | || | | ||||| | |||||| || Sbjct 4717 GGACTTCTTGGTTGGGATAGTAGTGTTACGCTTGATGAGAGGAGTCATGACACCACCAGC 4658 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 517570 ||||| | ||| | || ||||| | |||||| | |||| || | || | | || Sbjct 4657 AGTTTCGATACCCAAGGAGAGAGGGGCGACATCGAGAAGGAGGATTTCGTTGGTCGACTT 4598 Query 517571 TCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 517629 | || | | |||| || ||||| ||||| | ||| || ||||| || ||||| || Sbjct 4597 GGAAGAGGTGTCACCAGACAGGATAGCAGCTTGGACAGCGGCGCCATAAGCGACAGCCTC 4538 Query 517630 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 517689 ||| || || | | | || | | || || ||||| |||| |||| | | ||| Sbjct 4537 ATCGGGGTTGATGGACTTGTTAGGCTCCTTTCCGTTGAAGAAATCGGAAACCATCT-TCT 4479 Query 517690 T-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 517748 | ||| || ||||||| || || || || || |||||||| || || || || | Sbjct 4478 GGATCTTTGGGATACGAGTAGAACCACCGACCAAGACAATTTCGTGGACGGAGGACTTGT 4419 Query 517749 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTG 517808 | | || | ||| | || || || || || | | | || | ||| Sbjct 4418 CAATCTTGGCATCACGGAGGACACGCTCGACAGGCTCCATGGTGGAACGGAAGAGGTCCT 4359 Query 517809 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 517866 ||||| ||||| || || | || || || | || || || || || ||||| Sbjct 4358 GGCAAAGCTCTTCAAAGCGGGCACGGGT--GATGGAAGTGTAGAAGTCGATACCCTCGAA 4301 Query 517867 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 517926 | ||| |||| ||||| | ||| || | || |||||| || | || |||||||| || Sbjct 4300 AAGAGAGTCAATCTCAATGGAAGTCTGGGCCGCAGAAGAGAGAGTGCGCTTAGCACGCTC 4241 Query 517927 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA--TCTGTTTTATAT 517984 || || || | || | || | ||| || |||| | ||| || | || | Sbjct 4240 GCAAGCAGTTCGAAGACGGCGAAGGGCACGGGC--ATTGCTGGAAAGATCCTTCTTGTGC 4183 Query 517985 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 518044 || | ||| || || | ||| | | ||||| || || || || || ||||| ||| Sbjct 4182 TTGCGCTTAAACTCATTGACAAAGTGGTTGACAAGGCGGTTGTCGAAGTCCTCACCACCC 4123 Query 518045 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 518104 || | ||| | || | || | | |||| ||| | || || |||| | ||| || Sbjct 4122 AAGTGAGTGTCACCAGCAGTGGACTTGACTTCGAAGATACCTTCCTCAATGGTCAAGAGG 4063 Query 518105 GTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 518164 | |||||| || |||||||||| || || || | ||||| ||| || Sbjct 4062 GAAACATCAAAAGTACCACCACCCAAGTCGAAGATCAAAACATTGCGTTCACCTTCAACC 4003 Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || || || | |||||| |||| || |||||||| ||||| || || || | | ||| Sbjct 4002 TTCTTGTCCAAACCATAAGCAATGGCGGCAGCAGTGGGTTCGTTGATGATACGAAGCACA 3943 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || ||||| ||||| || ||||| || || ||||| | || |||||||| || || Sbjct 3942 TTGAGACCGGCAATCAGACCGGCATCCTTGGTAGCTTGACGCTGGGAATCGTTGAAGTAG 3883 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344 ||||||||||| | ||| |||| | || | ||| | |||| || || | | Sbjct 3882 GCAGGAACAGTGACAACAGCATTGTTGACAGTTCCACCGAGGTAAGATTCGGCAGTCTCT 3823 Query 518345 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCA-TT 518403 |||| || | || | ||| ||||| || | ||| || | | ||||||| ||| Sbjct 3822 CTCATCTTGGTCAAGACCATCGATGAGATCTCTTCAGGAGTGAACTGCTTGGTCTCACCC 3763 Query 518404 TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTA 518463 |||| || | || || || || || | ||| | || || || ||| Sbjct 3762 TTGA-ATTCGATTTGAATGACAGGCTTGCCGCCCTTGTCAATGATCTTGAAGGGGAAGTG 3704 Query 518464 TTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATCGTTTTGCAT 518522 |||||||| | || || || | || || | | ||| || | ||||| || | Sbjct 3703 CTTCATATCAGCCTGCAC-CTCAGCATCGGCGAATTTACGACCGATAAGACGTTTGGCGT 3645 Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 | || | || ||||| ||||| || || |||||| |||||| |||||||| |||||| Sbjct 3644 CGAAGACGGTGTTGGTAGGATTCATGGCGACTTGATTTTTGGCGGCATCTCCGATCAGAC 3585 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 | || || || || || | ||| | || ||||| || || || || ||||| || || | Sbjct 3584 GCTCGGTATCCGTGAAAGCAACGAACGAGGGAGTAGTTCGGTTGCCCTGATCGTTGGCGA 3525 Query 518643 TAATTTC 518649 | ||||| Sbjct 3524 TGATTTC 3518 >seq4720 Length=150193 Score = 87.8 bits (96), Expect = 1e-11 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 671659 TGAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAAC 671718 ||||||||||||||| | ||||| |||||||| ||| | ||| |||| ||| | || || Sbjct 12046 TGAATTTTTCTTCCACGCCATGGCTGGTCGTGAGGGTCTCATTGATACCGCTGTCAAGAC 11987 Query 671719 TGCTGATACTGGTTATATTCAAAGAAAACTTGTTAA 671754 || || || ||||| |||||| |||| |||||||| Sbjct 11986 AGCCGAAACCGGTTACATTCAACGAAAGCTTGTTAA 11951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780581677400806