Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq650 461 1e-124
seq1222 152 7e-32
seq3934 98.7 1e-15
>seq650
Length=49892
Score = 461 bits (510), Expect = 1e-124
Identities = 986/1457 (68%), Gaps = 21/1457 (1%)
Strand=Plus/Minus
Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754
|| |||| ||||| || ||||| |||||||| | || | ||| || || ||| |
Sbjct 4905 ACGTTCATGATACCGTTGGCATCGACATCGAAAGTGACCTCAATCTGAGGAACACCACGT 4846
Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTC 6814
|| || | ||||| || || | || ||| |||| || || |||| ||| | |
Sbjct 4845 GGGGCAGGAGGAATGCCAGTAAGTTCGAATTTACCGAGCAAGTTGTTGTCCTTGGTGCGG 4786
Query 6815 TTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAG 6874
||||||||||||| || || | ||| || |||| || || || || |||
Sbjct 4785 GTACGTTCACCTTCGTACACCTGAATCAAGACACCAGGCTGGTTGTCCGCGAAAGTAGAG 4726
Query 6875 AAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATA 6934
|| | | ||||| | ||| || || || || | | || | || ||||| | |
Sbjct 4725 AAAGTCTCGGACTTCTTGGTTGGGATAGTAGTGTTACGCTTGATGAGAGGAGTCATGACA 4666
Query 6935 CCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTC-TTG 6993
||||| |||||||| || | || ||||| | || || | || | | || |||
Sbjct 4665 CCACCAGCAGTTTCGATACCCAAGGAGAGAGGGGCGACATCGAGAAGGAGGATTTCGTTG 4606
Query 6994 AACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCG 7051
| || | | |||| | | ||| || |||||||| | || || || |||
Sbjct 4605 GTCGACTTGGAAGAGGTGTCACCAGACAGGATAGCAGCTTGGACAGCGGCGCCATAAGCG 4546
Query 7052 ACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAAC 7111
|| |||||||||||||| || | || || | || || ||||| || |||| || | |
Sbjct 4545 ACAGCCTCATCGGGGTTGATGGACTTGTTAGGCTCCTTTCCGTTGAAGAAATCGGAAACC 4486
Query 7112 ATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTC 7171
|| | || || || ||||| || || || ||||||||||| || ||||| | ||
Sbjct 4485 ATCTTCTGGATCTTTGGGATACGAGTAGAACCACCGACCAAGACAATTTCGTGGACGGAG 4426
Query 7172 GATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAAC 7231
|| || || ||||| | || || || |||||||| ||||| ||||||
Sbjct 4425 GACTTGTCAATCTTGGCATCACGGAGGACACGCTCGACAGGCTCCATGGTGGAACGGAAG 4366
Query 7232 AAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCG 7291
| |||| || || || ||||| || |||||||| ||||| || ||||| || | ||
Sbjct 4365 AGGTCCTGGCAAAGCTCTTCAAAGCGGGCACGGGTGATGGAAGTGTAGAAGTCGATACCC 4306
Query 7292 TCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCG 7351
||| | | || ||||| ||||||| || || |||| ||||| | || ||||| ||
Sbjct 4305 TCGAAAAGAGAGTCAATCTCAATGGAAGTCTGGGCCGCAGAAGAGAGAGTGCGCTTAGCA 4246
Query 7352 CGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTA 7411
||||| || || ||||| | ||| ||||||||||| | || | ||||| ||| |||||
Sbjct 4245 CGCTCGCAAGCAGTTCGAAGACGGCGAAGGGCACGGGCATTGCTGGAAAGATCCTTCTTG 4186
Query 7412 TGTTTACGTTTAAACTC-TTCAGAGAAGT-GTCG--AAGGAGTCTCGAATCGAAATCTTC 7467
|| || || |||||||| || | | |||| || | |||| | | ||||| || ||
Sbjct 4185 TGCTTGCGCTTAAACTCATTGACA-AAGTGGTTGACAAGGCGGTT---GTCGAAGTCCTC 4130
Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527
|||||||||||| || || || || || | |||||||| ||||||||| | |||||| |
Sbjct 4129 ACCACCCAAGTGAGTGTCACCAGCAGTGGACTTGACTTCGAAGATACCTTCCTCAATGGT 4070
Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTATCGT 7586
|| | ||||||||||| ||||||||||||| ||| || || | || || ||| ||
Sbjct 4069 CAAGAGGGAAACATCAAAAGTACCACCACCCAAGTCGAAGATCAAAACATTGCGT-TCAC 4011
Query 7587 CGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC 7646
| || ||||| || | ||| || || || || || || || ||||| || || ||||
Sbjct 4010 CTTCAACCTTCTTGTCCAAACCATAAGCAATGGCGGCAGCAGTGGGTTCGTTGATGATAC 3951
Query 7647 GAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCG 7705
|||| ||| || || || ||||| | ||||| || || ||||| || || ||||||
Sbjct 3950 GAAGCACA-TTGAGACCGGCAATCAGACCGGCATCCTTGGTAGCTTGACGCTGGGAATCG 3892
Query 7706 TTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCC 7765
|| |||||||| || || || || || || | |||| | |||||| || |||||
Sbjct 3891 TTGAAGTAGGCAGGAACAGTGACAACAGCATTGTTGACAGTTCCACCGAGGTAAGATTCG 3832
Query 7766 GCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTC 7825
|| | ||| |||| ||||| | ||||||||||| |||||||||| | ||||| ||
Sbjct 3831 GCAGTCTCTCTCATCTTGGTCAAGACCATCGATGAGATCTCTTCAGGAGTGAACTGCTTG 3772
Query 7826 GTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTA 7885
|| ||||| || || || | || ||| | || || |||| | | || | |||
Sbjct 3771 GTCTCACCCTTGAATTCGATTTGAATGACAGGCTT-GCCGC--CCTTGTCAATGATCTTG 3715
Query 7886 TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGA 7945
| | | | |||||||| | || |||| || | || || | |||||||||
Sbjct 3714 AAGGGGAAGTGCTTCATATCAGCCTGCACCTCAGCATCGGCGAATTTACGACCGATAAGA 3655
Query 7946 CGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCC 8005
|| || || || || || ||||| | || |||||||| ||| || || || || ||
Sbjct 3654 CGTTTGGCGTCGAAGACGGTGTTGGTAGGATTCATGGCGACTTGATTTTTGGCGGCATCT 3595
Query 8006 CCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCT 8065
||||| ||||| || || ||||| || || ||| |||| || || ||||| || ||
Sbjct 3594 CCGATCAGACGCTCGGTA---TCCGTGAAAGCAACGAACGAGGGAGTAGTTCGGTTGCCC 3538
Query 8066 TGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTT 8125
|| ||||| || || ||||| | ||||| | | ||| || || || || || ||
Sbjct 3537 TGATCGTTGGCGATGATTTCGATTCGGTCATCACGGTAGATACCCACACAGGAGTATGTG 3478
Query 8126 GTTCCTAAATCAATACC 8142
|| || ||||| |||||
Sbjct 3477 GTACCCAAATCGATACC 3461
>seq1222
Length=133609
Score = 152 bits (168), Expect = 7e-32
Identities = 366/546 (67%), Gaps = 17/546 (3%)
Strand=Plus/Minus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| ||||||||||||||||| || || | | ||| || | |||||| | | |||
Sbjct 104075 AGATCCTCAAAACGTGCACGAGTGATCTGGGAGTTGAAGTCTTCTCCGTCGAAAAGGGAA 104016
Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361
||||| || | || || || | ||| | | | | || ||||| || ||||| || |
Sbjct 104015 TCAATCTCGACAGTGGTCTGAGTAGCGTTGGAAAGA--GTGCGCTTGGCACGCTCGCAAG 103958
Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421
| ||||| | ||| || ||||| | | | |||||| | ||| ||||| || || |
Sbjct 103957 CAGTTCGGAGACGGCGGAGGGCTCTGGCATCACCGGAGAGATCCTTCTTGGTCTTTCGCT 103898
Query 7422 TAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480
||||||| ||| || |||| | || | | ||| || || | |||||| | ||
Sbjct 103897 GGAACTCTTTCTTGAAATGATCGA-GAAGGTTGGTATCAAAGTCCTGACCACCAAGATGG 103839
Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540
||||| || || || || || || |||| || || | ||||| | | ||||||
Sbjct 103838 GTATCACCAGCAGTAGCCTTAACAGTGAAGACGCCACCCTGGATGTTGAGGAGAGAAACA 103779
Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG-TCGTCTT-TGTTCT 7598
|| || ||||||||||||| || ||||||| || || ||| || | || | |||
Sbjct 103778 TCGAAAGTACCACCACCCAAATCGTAAATGAGAACATT----TCGCTCCTTTTCAGATCT 103723
Query 7599 T-----ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACA 7653
| | | | ||||| || || || || || || || || || |||||||| ||
Sbjct 103722 TCCAGAACCCAAGCCGTAAGCAATGGCTGCAGCAGTGGGCTCGTTGATAATACGGAGGAC 103663
Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713
||||| |||||| || | | ||||| || || ||||| || || ||||| |||||
Sbjct 103662 GTTCAAGCCAGCGATGGCACCGGCATCCTTGGTTGCTTGACGCTGGTTGTCGTTGAAGTA 103603
Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773
|||||| || || | ||| || | | ||||||||| | || | | ||||| | ||
Sbjct 103602 GGCCGGTACGGTGATGACAGCCTTGGAGACTTTCTTTGCAAGCTTGGTCTCCGCAACCTC 103543
Query 7774 TTTCAT 7779
||||||
Sbjct 103542 TTTCAT 103537
>seq3934
Length=413549
Score = 98.7 bits (108), Expect = 1e-15
Identities = 356/552 (64%), Gaps = 15/552 (3%)
Strand=Plus/Plus
Query 105529 GGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATC 105588
||||||||||| | ||||| || | ||||| || |||||||||| ||| || ||
Sbjct 408790 GGACAAAACAAGGTCCAATCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCGGGGGTC 408849
Query 105589 CACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATT 105648
|| | || ||||| || || || | || || | || || || ||| |
Sbjct 408850 CAAAGAGCAAGGAAGAGATCACGGGCTCTTACTTCCTCCTTTCCGTGGTTTTTACGGAGA 408909
Query 105649 TCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAAT------AGAC 105702
|| | ||| |||| ||||||| |||||| ||||| | ||| | |||| || |
Sbjct 408910 TCTAAAAACTCGAAGATATCGGAGTGCCAAGGTTCAAGATAAATGGCAAAGGCGCCAGGC 408969
Query 105703 CCTTTACGACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATT 105762
| ||| | ||| | |||| | |||||||| || || |||| | || || | |||
Sbjct 408970 CGTTT--GTTGCCAC-CTTGGTCGACATATCGAGCTGTATTGTTAAAGACACGGAGCATG 409026
Query 105763 GGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACA 105822
|| | || || | || | || |||||||| ||| | || | | || || | |
Sbjct 409027 GGGACGATTCCGTTAGAGGAGCCGTTTGTTCCTGCAATGTAGGAGCCAGTCGCGCGAATA 409086
Query 105823 TCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACT 105882
|| | | | || ||||| ||||| ||| || | || || ||||
Sbjct 409087 CGATGGATATTAAGACCGATACCGCCAGCTGTCTTGGAAATCAGAGCGCAGGTCTTTAGA 409146
Query 105883 GTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATT 105942
|||||||| ||||| ||||| ||||||||||| | |||| || ||||| || | |||
Sbjct 409147 GTATCGTAGATACCATCGATGCTATCTTCCTTCATATCAATGAGAAAACAGGAGGCCATC 409206
Query 105943 TGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTC 106002
|||||| ||||| || || ||||| ||||| || | ||||| || | ||| ||||
Sbjct 409207 TGTGGTTGCGGTGTTCCCGCGTTGAAAAGAGTGGGGGAAGCATG--TGTA-AAATATTTC 409263
Query 106003 ---GATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATA 106059
|| | | | || ||||| | | | ||||| || | |||||||| ||||
Sbjct 409264 TGAGACATCAGATTATACGTTTCGATCGCCTTCTCAATGTCTTCGCCATGAATGCCAACC 409323
Query 106060 GCGACGCGCATA 106071
|| || ||||||
Sbjct 409324 GCAACACGCATA 409335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635094287134840
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