Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3934 84.2 3e-11 >seq3934 Length=413549 Score = 84.2 bits (92), Expect = 3e-11 Identities = 463/727 (64%), Gaps = 34/727 (5%) Strand=Plus/Minus Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 ||| | |||||| | || ||||||| |||||||| | || | |||||||| ||||| Sbjct 408628 TGGTATGCTATTTTGGAGGCTCAAACAGAGACTGGGAACCCCTTCATGCTTTATAAAGAT 408569 Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397 || || |||| |||||||| ||||| || | || || ||| |||||| | || Sbjct 408568 GCGTGCAACCGCAAGAGTAACCAAAAAAACCTTGGAACTATTCGGAGCTCCAACTTGTGC 408509 Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 112457 || |||||| | || | || | || || || || || || | || || | Sbjct 408508 ACGGAAATCATCGAGTACACCGCGCCGGACGAAGTCGCAGTTTGCAATTTGGCGTCCCTT 408449 Query 112458 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT-TGATTATGAAAAACTCCACGA 112516 ||| | |||| ||||| ||||| | | | | | ||| | || | | | || || Sbjct 408448 GCTTTGCCCACATATGTCGATCCTGTC-CGGGGCGAGTATGACTTTGGGAGATTGCATGA 408390 Query 112517 AGTTACGAAAAC---TGT-CACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACC 112572 ||| || || ||| | ||| | |||||| | ||||| | ||| || | Sbjct 408389 AGTCACACAAGTCCTTGTTCTCAA----CTTAAACAAGATCATTGACAACAATCACTATC 408334 Query 112573 CCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAA 112631 |||| ||| || | || ||| | | || ||||| |||| | ||||| || Sbjct 408333 CCGTCCCAGAA-GCCAGGAAGAGTAACTTCCGTCATCGTCCTATTGCGGTGGGTGTGCAG 408275 Query 112632 GGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-----CATTTGATTCCGACGAAGCGA 112686 || ||||| |||| | ||| ||| ||| || | ||||| || || || | Sbjct 408274 GGACTCGCTGATG----CTTTCCTTG-CGCTGCGATTGCCGTTTGACTCGCCTGAGGCAA 408220 Query 112687 AGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGG 112746 || | | ||| | || || || ||||| || || || ||||| ||| || | Sbjct 408219 AGCAGTTGAATATTCAAATCTTCGAAACAATCTACCATGCAGCTCTGACCGCGTCTTGTG 408160 Query 112747 AGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGG 112806 | | || ||||||||||||| |||||||| | ||| |||||||| | || ||| ||| Sbjct 408159 ACATAGCCAAGGTTGATGGTCCTTATGAAACTTATGAAGGTTCTCCCGTTT--CAAAGGG 408102 Query 112807 TGCTT--CAATTTGATATGTGGGAAGGTGA----GACCAAGCTTCACTACGACTGGGACG 112860 | ||| || | ||||||| |||| |||| ||| | ||| | ||||||||| Sbjct 408101 TACTTTGCAGTACGATATGT-GGAACGTGACTCCGACTGACCTT---TGGGACTGGGACA 408046 Query 112861 CTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGC 112920 | |||||| | ||| | | ||| | || |||||| | | | || || |||| Sbjct 408045 CCCTCAAGAAGGATATCGCAAAACACGGTGTACGCAACAGTTTACTTGTTGCTCCGATGC 407986 Query 112921 CAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGA 112980 | || ||| ||| || ||| | ||| || ||||| ||||| || ||||| | | Sbjct 407985 CTACTGCCAGCACGAGTCAGATCCTCGGTTTCAACGAATGTTTTGAGCCATACACATCAA 407926 Query 112981 ACATCTA 112987 ||||||| Sbjct 407925 ACATCTA 407919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620704759732720