Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3934 159 4e-34 seq2228 116 4e-21 >seq3934 Length=413549 Score = 159 bits (176), Expect = 4e-34 Identities = 474/719 (66%), Gaps = 18/719 (3%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||||||| | ||||| || ||||| ||||| || ||| | ||| || ||| | Sbjct 407919 TAGATGTTTGATGTGTATGGCTCAAAACATTCGTTGAAACCGAGGATCTGACTCGTGCTG 407978 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| || || | | | |||||| || | ||| | || ||| | | Sbjct 407979 GCAGTAGGCATCGGAGCAACAAGTAAACTGTTGCGTACACCGTGTTTTGCGATATCCTTC 408038 Query 106055 TTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTG-- 106110 ||||| |||||||| | | | || | || |||| |||| ||||||| | || Sbjct 408039 TTGAGGGTGTCCCAGTCCCAAAGGTCAG-TCGGAGTCACGTTCC-ACATATCGTACTGCA 408096 Query 106111 AAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGC 106170 ||| |||| ||| ||| |||||||| ||| | || ||||| | ||| | | | || Sbjct 408097 AAGTACCCTTTGAAACG--GGAGAACCTTCATAAGTTTCATAAGGACCATCAACCTTGGC 408154 Query 106171 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 106230 | ||||| ||| ||| | ||| || || || ||||| ||||| || ||||| Sbjct 408155 TATGTCACAAGACGCGGTCAGAGCTGCATGGTAGATTGTTTCGAAGATTTGAATATTCAA 408214 Query 106231 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 106290 || ||| || ||| || ||||| | | || | || || |||| ||||| || Sbjct 408215 CTGCTTTGCCTCAGGCGAGTCAAACGGCAATCGCAGCGCAAGGAAAGCATCAGCGAGTCC 408274 Query 106291 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGG 106349 || ||||||| ||||||| | || || | ||| ||| | || ||| |||| Sbjct 408275 CTGCACACCCACCGCAATAGGACGATGACGGAAGTTACTCTTCCTGGCT-TCTGGGACGG 408333 Query 106350 GATAAAAATTTCTGTCAATGA-CTCGGTTTAGATTTTTGGTAACAAT--CTT-TGTGATT 106405 |||| ||| ||||||||| || | || || ||| ||||| ||| ||||| | Sbjct 408334 GATAGTGATTGTTGTCAATGATCTTGTTTAAG----TTGAGAACAAGGACTTGTGTGACT 408389 Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 106465 ||||| | | | || | ||| | || | || |||||| | || | || Sbjct 408390 TCATGCAATCTCCCAAAGTCATACTCGCCCCGGACAGGATCGACATATGTGGGCAAAGCA 408449 Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525 | || |||||||||||||| || || ||| | |||||||| | ||||| || Sbjct 408450 AGGGACGCCAAATTGCAAACTGCGACTTCGTCCGGCGCGGTGTACTCGATGATTTCCGTG 408509 Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585 ||||||||||| ||| ||| || || | || |||||||||||||| |||||||||| Sbjct 408510 CACAAGTTGGAGCTCCGAATAGTTCCAAGGTTTTTTTGGTTACTCTTGCGGTTGCACGCA 408569 Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 || || || |||||| |||| |||| ||||| || || | || | ||| || | ||| Sbjct 408570 TCTTTATAAAGCATGAAGGGGTTCCCAGTCTCTGTTTGAGCCTCCAAAATAGCATACCA 408628 >seq2228 Length=283306 Score = 116 bits (128), Expect = 4e-21 Identities = 331/504 (66%), Gaps = 20/504 (4%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || ||||| |||||||| |||||||||||||| || | | ||||| |||||| Sbjct 201894 TAATCACCAACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAACGAGATGTTATCCATA 201835 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 117099 ||||||||||| || | || || | | | | || | | |||| || Sbjct 201834 AAGTCAAATGGGTTGGTGGCATTGTAGAACTTTTTGTTGCCCAAAGCAACA------AGC 201781 Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159 || | || | ||| |||| || || | | |||| || | |||||| || | || Sbjct 201780 AGTCTGTCGGCAACAAACTCGATATATTGGCACATGAGCTTGGCGTTCATGCCAAGAAGG 201721 Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219 |||||| || || || | ||| | |||||||||||||| |||||| | | |||| Sbjct 201720 GCACATGGAAGAGCATCAGTTAAGAATTCCTTCTCAATCTCAACTGCCTCTGTGATGATG 201661 Query 117220 GCGTGGATAGTTTCGGTAGTG---GGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 117276 || | | | | | || | || | || || | |||||| |||| Sbjct 201660 GCCTCAACGG---CCGAAGGGCCGGGGCGATGGCGGAGGTGGGAGAAGAGGAGGCAGGCA 201604 Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336 || || |||||||||||| || |||||||| | |||||| || || || || ||| Sbjct 201603 AAGTCGGTGTGGAGACCCTCGTCACGGGAAATCAATTCATTCGAAAAAGTGAGACCGGGC 201544 Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCC 117396 || || || || ||||||||||| |||||| ||| || || |||||||||||| Sbjct 201543 ATAAGGCCACGTTTCTTCAACCAGAAAATAGAAGCGAAAGAGCCACTGAAGAAGATACCT 201484 Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCA 117455 || || ||||| |||| ||||| | |||||||| | || | |||| | | ||| Sbjct 201483 TCAACGGCTGCAAAGGCAACCAGGCGTTGGGCGAAGGTG-GATTCCTTGTCTTGGATCCA 201425 Query 117456 TTTCATTGCCCATTTCGCCTTCTT 117479 | || ||||| | |||||||| Sbjct 201424 TCGAATGGCCCAATCAGCCTTCTT 201401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589945025039240