Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3060 123 6e-23 seq2521 116 8e-21 seq4836 114 3e-20 >seq3060 Length=205498 Score = 123 bits (136), Expect = 6e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 |||||| || | || |||||| || || || || || ||||||| || || | || Sbjct 123097 TCTCAATACCAAATGCAGAGTGCTTTCCTTCTGGATGTTATAATCGGAGAGTGTCCGACC 123038 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 ||| || |||||||| || || ||||| ||||| |||||||| || || || |||||||| Sbjct 123037 ATCCTCAAGCTGCTTTCCAGCAAAGATGAGTCGCTGTTGGTCGGGTGGGATACCTTCTTT 122978 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 ||||||||||| ||| ||||| || || ||||| || || || || | |||| Sbjct 122977 ATCTTGAATTTTCGTCTTAACGTTGTCGATCGTGTCTGACGACTCGACCTCCAATGTAAT 122918 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || || || || || || || | |||||| Sbjct 122917 AGTCTTGCCGGTTAATGTCTTAACAAAAATTTGCAT 122882 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || || |||||||| ||||| ||||| || | || || | || || ||| Sbjct 122862 ACGAGATGCAGTGTAGACTCTTTCTGAATGTTGTAGTCTGATAGCGTGCGACCGTCCTCG 122803 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || || || || | || || |||||||| ||||| || || ||||||||| Sbjct 122802 AGCTGTTTGCCGGCAAAAATCAAACGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGA 122743 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||||| || || ||||| ||| || |||||||| || | || ||| Sbjct 122742 ATCTTAGTTTTGACGTTGTCGATTGTGTCTGAAGACTCTACTTCAAGCGTGATTGTTTTT 122683 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | ||||| Sbjct 122682 CCGGTCAAGGTCTTCACAAAAATCTGCAT 122654 >seq2521 Length=135005 Score = 116 bits (128), Expect = 8e-21 Identities = 96/117 (82%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| ||||||||||| || || ||||| || | || || | ||||| ||| Sbjct 57590 ACGAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCATCCTCG 57649 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| || |||||||| || ||||| ||||| |||||||||||||| |||||| Sbjct 57650 AGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCT 57706 >seq4836 Length=199183 Score = 114 bits (126), Expect = 3e-20 Identities = 135/181 (75%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 ||||| |||||||||||| | ||| | || || ||||||||||| || ||||| || Sbjct 162947 TTTTGGATATTGTAATCGCTCAAAGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAAATC 162888 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | || || ||||| |||||||||||||| ||||| || ||||| ||| || || || Sbjct 162887 AAACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATTTTGCTCTTCACATTGTCG 162828 Query 195073 ATGGTGTCC--GAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 || ||||| | ||| ||||||||||||| | ||||| || || | || || |||| Sbjct 162827 ATCGTGTCGCTGGACT--CCACTTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 162770 Query 195131 A 195131 | Sbjct 162769 A 162769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109412641904717