Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3060 118 7e-22 >seq3060 Length=205498 Score = 118 bits (130), Expect = 7e-22 Identities = 158/215 (73%), Gaps = 10/215 (5%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || ||| ||||| ||||| || |||||||| | || |||| || Sbjct 122343 AACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCTTC 122284 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||||| || || || || | ||||||||||| | || | ||||||||||| Sbjct 122283 AAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATTCCCTCCTTGTCTTG 122224 Query 34892 AATCTTCTGT-TTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATG 34946 ||||| ||| || || || | ||||| ||||||| |||||| || | ||| ||| Sbjct 122223 GATCTT-TGTCTTCAC--AT--TGTCGATAGTATCACCGGACTCAACCTCAAGGGTGATG 122169 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || || | |||||| ||||| |||||||| Sbjct 122168 GTCTTGCCAGTCAAAGTCTTGACAAAAATCTGCAT 122134 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||| ||||| || || | || | || || |||||||| |||||||| Sbjct 122844 TCTTTCTGAATGTTGTAGTCTGATAGCGTGCGACCGTCCTCGAGCTGTTTGCCGGCAAAA 122785 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || ||||||||| | || | ||||||||||| |||||| ||||||| Sbjct 122784 ATCAAACGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGAATCTTAGTTTTGACGTTG 122725 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || || | || || |||||||| || | ||||||||| Sbjct 122724 TCGATTGTGTCTGAAGACTCTACTTCAAGCGTGATTGTTTTTCCGGTCAAGGTCTTCACA 122665 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 122664 AAAATCTGCATA 122653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324614407154328