Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_016762.1
Length=49135
Score E
Sequences producing significant alignments: (Bits) Value
seq4176 239 1e-58
seq1221 167 7e-37
>seq4176
Length=744
Score = 239 bits (264), Expect = 1e-58
Identities = 292/393 (74%), Gaps = 4/393 (1%)
Strand=Plus/Minus
Query 5513 GGCTTGCGGAAGATCAGCAGGTACTCGGGCATGCCGACACCCATCTTGGTGCCGTCCTTG 5572
|||||||| | | ||||| ||| ||||| ||||| |||||||| |||||||||||
Sbjct 391 GGCTTGCGCATCAGCAGCACGTATTCGGGGCTGCCGCAGCCCATCTTCGTGCCGTCCTTC 332
Query 5573 CACTGTTCCGTCCACGAGAGGCGGTAGGTCTGGGCGTTCTCGCGAACCACGTCGGTGACG 5632
| || | |||| ||||||||||||||| ||||||||| || ||||||||||||
Sbjct 331 AGCATCTCGCTGTACGACAGGCGGTAGGTCTGGTTGTTCTCGCGCACGACGTCGGTGACG 272
Query 5633 ATGGTCTTCATGCCCATATAGGCCCAGCCATGCTTGACGAAG-GCTCGAGTCACTTCCAT 5691
| ||| |||||||||| | |||| || | || |||||| |||||
Sbjct 271 ACGGTGATCATGCCCATGAACTGGAAGCCGTGGCGCATATAGTGCTCGATGCACTTGGC- 213
Query 5692 GTGGAAGGGGTAGACGGTCTGGAAGCCAAGGCCGGTCATTCCGCCGGGAATGATGCGATC 5751
|||||| || | ||||||| | | || |||||||| | | ||| | ||| || ||
Sbjct 212 GTGGAACGGATTGACGGTCGGCACACCCTCGCCGGTCACTGCACCGAACAGGATCCGGTC 153
Query 5752 CTTCACGTGGATGCAGGCCAGACG-CCCGGGGATGGTCACGCGCAGCAGTTCCGGGATCA 5810
|||||||||||||||||| || || ||||| | | | | || ||||| | ||| |||
Sbjct 152 CTTCACGTGGATGCAGGCGAGCCGGCCCGGCGCCAG-CGCACGGAGCAGGTTCGGCGTCA 94
Query 5811 GATAGTCCATCTGCTCGAAGAAGTGCGCGTTGTCGTCGGTGTGGCCGAAGTCGGCGTAGT 5870
||| ||||||||| ||||||| ||| ||| ||||| ||||||||||||||| ||||
Sbjct 93 GATGATCCATCTGCGCGAAGAAATGCCCGTCATCGTCCGTGTGGCCGAAGTCGTTGTAGC 34
Query 5871 TCGGCGAGTACTCGTACTGGGTGCTGAAGGGGA 5903
|||||| ||||||||| ||| ||||||| ||||
Sbjct 33 TCGGCGTGTACTCGTAGTGGTTGCTGAACGGGA 1
>seq1221
Length=9013
Score = 167 bits (184), Expect = 7e-37
Identities = 239/332 (72%), Gaps = 15/332 (5%)
Strand=Plus/Minus
Query 21195 TGAGCCTGCTGGTGGTGGACTACCTGCAGCTGCTG---GAGAGCTCCGGCAAGTCC-ACT 21250
|| ||||| | |||||||||||||||||||| || | | ||| |||| | | ||
Sbjct 372 TGGGCCTGATCGTGGTGGACTACCTGCAGCTCATGAGCGTGTCCTCGGGCATGAGCGACG 313
Query 21251 CGCACCGAGG-AC----GTCAGCGACATGTCCCG---CCAGTGCAAGCTGCTGGCGATGG 21302
| |||| | || || |||| || ||||| || | ||| |||||| | ||
Sbjct 312 AGAACCGCGCCACCGCGGTGGGCGAGATCTCCCGTGGCCTG---AAGGCGCTGGCCAAGG 256
Query 21303 AGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGA 21362
| || || ||| ||||||| |||||||||||| ||| | ||||| ||| |
Sbjct 255 AACTGGGCTGCCCGGTGATCGCGCTGTCGCAGCTGTCACGCGGCGTGGAGTCGCGCACCG 196
Query 21363 ACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATG 21422
||||||| ||||||||| ||||||||||| || || || ||||||||||||||||| |
Sbjct 195 ACAAGCGCCCGATGATGAGCGACCTGCGCGAATCGGGCGCCATCGAGCAGGACGCCGACG 136
Query 21423 TGATCATGTTCGTGTACCGCGACGAGGTCTACCACCCGGATACCCAGTACCGCGGCGTGG 21482
| ||||||||| | ||||||||||| |||| || ||| || || | | ||||||||
Sbjct 135 TCATCATGTTCATCTACCGCGACGACTACTACAACAAGGACTCCAAGGAGCCCGGCGTGG 76
Query 21483 CTGAGTTGATCATCGCGAAGCACCGCAACGGC 21514
| ||| |||||||| ||||| || || |||
Sbjct 75 CCGAGGTGATCATCAGCAAGCAGCGGAATGGC 44
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157101349557214
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |