Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq4176 239 1e-58 seq1221 167 7e-37 >seq4176 Length=744 Score = 239 bits (264), Expect = 1e-58 Identities = 292/393 (74%), Gaps = 4/393 (1%) Strand=Plus/Minus Query 5513 GGCTTGCGGAAGATCAGCAGGTACTCGGGCATGCCGACACCCATCTTGGTGCCGTCCTTG 5572 |||||||| | | ||||| ||| ||||| ||||| |||||||| ||||||||||| Sbjct 391 GGCTTGCGCATCAGCAGCACGTATTCGGGGCTGCCGCAGCCCATCTTCGTGCCGTCCTTC 332 Query 5573 CACTGTTCCGTCCACGAGAGGCGGTAGGTCTGGGCGTTCTCGCGAACCACGTCGGTGACG 5632 | || | |||| ||||||||||||||| ||||||||| || |||||||||||| Sbjct 331 AGCATCTCGCTGTACGACAGGCGGTAGGTCTGGTTGTTCTCGCGCACGACGTCGGTGACG 272 Query 5633 ATGGTCTTCATGCCCATATAGGCCCAGCCATGCTTGACGAAG-GCTCGAGTCACTTCCAT 5691 | ||| |||||||||| | |||| || | || |||||| ||||| Sbjct 271 ACGGTGATCATGCCCATGAACTGGAAGCCGTGGCGCATATAGTGCTCGATGCACTTGGC- 213 Query 5692 GTGGAAGGGGTAGACGGTCTGGAAGCCAAGGCCGGTCATTCCGCCGGGAATGATGCGATC 5751 |||||| || | ||||||| | | || |||||||| | | ||| | ||| || || Sbjct 212 GTGGAACGGATTGACGGTCGGCACACCCTCGCCGGTCACTGCACCGAACAGGATCCGGTC 153 Query 5752 CTTCACGTGGATGCAGGCCAGACG-CCCGGGGATGGTCACGCGCAGCAGTTCCGGGATCA 5810 |||||||||||||||||| || || ||||| | | | | || ||||| | ||| ||| Sbjct 152 CTTCACGTGGATGCAGGCGAGCCGGCCCGGCGCCAG-CGCACGGAGCAGGTTCGGCGTCA 94 Query 5811 GATAGTCCATCTGCTCGAAGAAGTGCGCGTTGTCGTCGGTGTGGCCGAAGTCGGCGTAGT 5870 ||| ||||||||| ||||||| ||| ||| ||||| ||||||||||||||| |||| Sbjct 93 GATGATCCATCTGCGCGAAGAAATGCCCGTCATCGTCCGTGTGGCCGAAGTCGTTGTAGC 34 Query 5871 TCGGCGAGTACTCGTACTGGGTGCTGAAGGGGA 5903 |||||| ||||||||| ||| ||||||| |||| Sbjct 33 TCGGCGTGTACTCGTAGTGGTTGCTGAACGGGA 1 >seq1221 Length=9013 Score = 167 bits (184), Expect = 7e-37 Identities = 239/332 (72%), Gaps = 15/332 (5%) Strand=Plus/Minus Query 21195 TGAGCCTGCTGGTGGTGGACTACCTGCAGCTGCTG---GAGAGCTCCGGCAAGTCC-ACT 21250 || ||||| | |||||||||||||||||||| || | | ||| |||| | | || Sbjct 372 TGGGCCTGATCGTGGTGGACTACCTGCAGCTCATGAGCGTGTCCTCGGGCATGAGCGACG 313 Query 21251 CGCACCGAGG-AC----GTCAGCGACATGTCCCG---CCAGTGCAAGCTGCTGGCGATGG 21302 | |||| | || || |||| || ||||| || | ||| |||||| | || Sbjct 312 AGAACCGCGCCACCGCGGTGGGCGAGATCTCCCGTGGCCTG---AAGGCGCTGGCCAAGG 256 Query 21303 AGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGA 21362 | || || ||| ||||||| |||||||||||| ||| | ||||| ||| | Sbjct 255 AACTGGGCTGCCCGGTGATCGCGCTGTCGCAGCTGTCACGCGGCGTGGAGTCGCGCACCG 196 Query 21363 ACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATG 21422 ||||||| ||||||||| ||||||||||| || || || ||||||||||||||||| | Sbjct 195 ACAAGCGCCCGATGATGAGCGACCTGCGCGAATCGGGCGCCATCGAGCAGGACGCCGACG 136 Query 21423 TGATCATGTTCGTGTACCGCGACGAGGTCTACCACCCGGATACCCAGTACCGCGGCGTGG 21482 | ||||||||| | ||||||||||| |||| || ||| || || | | |||||||| Sbjct 135 TCATCATGTTCATCTACCGCGACGACTACTACAACAAGGACTCCAAGGAGCCCGGCGTGG 76 Query 21483 CTGAGTTGATCATCGCGAAGCACCGCAACGGC 21514 | ||| |||||||| ||||| || || ||| Sbjct 75 CCGAGGTGATCATCAGCAAGCAGCGGAATGGC 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157101349557214