Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq3208 102 1e-16 seq1508 95.1 2e-14 >seq3208 Length=742 Score = 102 bits (112), Expect = 1e-16 Identities = 150/209 (72%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 86600 CCGCCGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCGAGACATAGTCGTAG 86659 |||||||||||||||| ||||| ||| ||||||||| ||| |||||||||||| ||| Sbjct 534 CCGCCGTTCGACAGCACCGGCGTTGCGGGCATGAACCACAGGCGCGAGACATAGTCATAG 593 Query 86660 AGCCGCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCGCACTCG-CGCGCGCGAAGGCCTC 86718 | ||||| ||||| ||||||| || || ||| ||| || |||| | ||| || Sbjct 594 ATGCGCTGCGCGTGCGCGGCGTCGTCGGCATAGG-CGCTGGCGACGCGGACAAAGAGATC 652 Query 86719 CTGGGGCGAGCTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTCTGAAGGGTGAAGTC 86778 || | || ||| || |||||||||||||| || | | |||| | ||| || Sbjct 653 CT---GATAGGATTCGCCCGGCAGCAGATAGCGGTCCTGCAACGTCTCCTTGCCGAAATC 709 Query 86779 GTCGAGCAGGGCGTCGCGGGTGAGATCGA 86807 | ||||| |||||||| | |||||| Sbjct 710 GGTCAGCAGCGCGTCGCGCGAATGATCGA 738 >seq1508 Length=2365 Score = 95.1 bits (104), Expect = 2e-14 Identities = 241/360 (67%), Gaps = 19/360 (5%) Strand=Plus/Minus Query 83462 CATCAGCAGAGCGAAGGACGAGAAAAGCTGCATCCCCTCGCCGAAGGCCGAGAACACGGC 83521 ||| |||| ||||| |||| ||| ||||||| |||||| |||| | ||||| ||| Sbjct 770 CATGAGCATCGCGAACGACGCGAACAGCTGCACGCCCTCGGTGAAGCCGCCGAACATGGC 711 Query 83522 GATGTCGACCATCAGGTCGGCGATCGAGTTGCCGCTGTC----CCGA--TTGAACATGTA 83575 || | || || ||||| | ||||||| |||| || |||||| Sbjct 710 GAG------CGTCCGG---GCGATATCCTCATCGCTGTCGACGCCGAAGTTCTGCATGTA 660 Query 83576 CTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGACCTCGGGCAG 83635 || ||||| || || | | | || |||||||| |||| | ||| || |||| Sbjct 659 ATCATGCTTGTCCTTCAGCTCGGCATATTCGAGGAACGCGCCATATTCGCTTTCCGGCAT 600 Query 83636 GCCCAGGGTGTCGATCAGCGTCGA-GTAGGCGTCGATGTGGTTGGCCTCGGCGGCGATGA 83694 ||| | ||||||| ||| || | |||||| ||||||| | || | | ||| Sbjct 599 GCCGATCGTGTCGAGCAG-GTGGCTGTAGGCCGCGATGTGCACCGTTTCCATGTTGCTGA 541 Query 83695 ACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAG-CGCGGGCCGTACTTCTCGAAG 83753 ||||| |||||||||| | || | || ||| ||||| ||||| |||||| Sbjct 540 ACGCGGTCAGCATCATCTTGATCTCGGTCGGCTTGAACACGCGG-CCGTATTTCTCGTGA 482 Query 83754 TAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTGCGTCAGCAGG 83813 |||| | ||| ||||| || |||||||||||||| ||||||| |||||||||||| Sbjct 481 TAGCAATCCTGCACCTCGACATCCGCCTGGGTGAAGAAGCGGAAGATCTGCGTCAGCAGG 422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690102151393200