Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq150 86.0 1e-11 seq4455 84.2 4e-11 >seq150 Length=622 Score = 86.0 bits (94), Expect = 1e-11 Identities = 71/86 (83%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 132949 GCTCCAAGTTTGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGG 133008 ||| ||||| || |||||||||||||| |||||||||||| ||||||||||| |||| Sbjct 84 GCTACAAGT--GACGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGG 27 Query 133009 TCGAGGGTTCAAATCCCTCCCCCGCA 133034 || ||||||||||| ||||||| Sbjct 26 TCACAGGTTCAAATCCTGTCCCCGCA 1 >seq4455 Length=977 Score = 84.2 bits (92), Expect = 4e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 71168 GAGATCGTGCCCTTCGAGTTCATGCGCGGGCGCACCTTCGACAACGCCTTCGTGATCCTC 71227 ||||||| ||| | | ||||||||||||||||| | ||||||||||||| |||||| Sbjct 620 GAGATCGCGCCTCTGGCATTCATGCGCGGGCGCACGCTGAACAACGCCTTCGTCATCCTC 561 Query 71228 GACGAGGCTCAGAACGCGTCG 71248 |||||||| |||||| || || Sbjct 560 GACGAGGCCCAGAACACGACG 540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895712082964920