Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq3208 102 1e-16 seq1508 96.9 5e-15 >seq3208 Length=742 Score = 102 bits (112), Expect = 1e-16 Identities = 150/209 (72%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 85317 CCGCCGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCGAGACATAGTCGTAG 85376 |||||||||||||||| ||||| ||| ||||||||| ||| |||||||||||| ||| Sbjct 534 CCGCCGTTCGACAGCACCGGCGTTGCGGGCATGAACCACAGGCGCGAGACATAGTCATAG 593 Query 85377 AGCCGCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCGCACTCG-CGCGCGCGAAGGCCTC 85435 | ||||| ||||| ||||||| || || ||| ||| || |||| | ||| || Sbjct 594 ATGCGCTGCGCGTGCGCGGCGTCGTCGGCATAGG-CGCTGGCGACGCGGACAAAGAGATC 652 Query 85436 CTGGGGCGAGCTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTCTGAAGGGTGAAGTC 85495 || | || ||| || |||||||||||||| || | | |||| | ||| || Sbjct 653 CT---GATAGGATTCGCCCGGCAGCAGATAGCGGTCCTGCAACGTCTCCTTGCCGAAATC 709 Query 85496 GTCGAGCAGGGCGTCGCGGGTGAGATCGA 85524 | ||||| |||||||| | |||||| Sbjct 710 GGTCAGCAGCGCGTCGCGCGAATGATCGA 738 >seq1508 Length=2365 Score = 96.9 bits (106), Expect = 5e-15 Identities = 259/387 (67%), Gaps = 23/387 (6%) Strand=Plus/Minus Query 82179 CATCAGCAGGGCGAAGGACGAGAAAAGCTGCATCCCCTCGCCGAAGGCCGAGAACACGGC 82238 ||| |||| ||||| |||| ||| ||||||| |||||| |||| | ||||| ||| Sbjct 770 CATGAGCATCGCGAACGACGCGAACAGCTGCACGCCCTCGGTGAAGCCGCCGAACATGGC 711 Query 82239 GATGTCGACCATCAGGTCGGCGATCGAGTTGCCGCTGTC----CCGA--TTGAACATGTA 82292 || | || || ||||| | ||||||| |||| || |||||| Sbjct 710 GAG------CGTCCGG---GCGATATCCTCATCGCTGTCGACGCCGAAGTTCTGCATGTA 660 Query 82293 CTCGTGCTTTTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGACCTCGGGCAG 82352 || ||||| || || | | | || |||||||| |||| | ||| || |||| Sbjct 659 ATCATGCTTGTCCTTCAGCTCGGCATATTCGAGGAACGCGCCATATTCGCTTTCCGGCAT 600 Query 82353 GCCCAGGGTGTCGATCAGCGTCGA-GTAGGCGTCGATGTGGTTGGCCTCGGCGGCGATGA 82411 ||| | ||||||| ||| || | |||||| ||||||| | || | | ||| Sbjct 599 GCCGATCGTGTCGAGCAG-GTGGCTGTAGGCCGCGATGTGCACCGTTTCCATGTTGCTGA 541 Query 82412 ACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAG-CGCGGGCCGTACTTCTCGAAG 82470 ||||| |||||||||| | || | || ||| ||||| ||||| |||||| Sbjct 540 ACGCGGTCAGCATCATCTTGATCTCGGTCGGCTTGAACACGCGG-CCGTATTTCTCGTGA 482 Query 82471 TAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTGCGTCAGCAGG 82530 |||| | ||| ||||| || |||||||||||||| ||||||| |||||||||||| Sbjct 481 TAGCAATCCTGCACCTCGACATCCGCCTGGGTGAAGAAGCGGAAGATCTGCGTCAGCAGG 422 Query 82531 GACTTCTCGT--TCGGCGTCAGCTTCT 82555 ||||| ||| |||||||||| Sbjct 421 TTGCGCTCGTGATCG--GTCAGCTTCT 397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700402326778440