Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_019407.1
Length=218929
Score E
Sequences producing significant alignments: (Bits) Value
seq3208 102 1e-16
seq1508 96.9 5e-15
>seq3208
Length=742
Score = 102 bits (112), Expect = 1e-16
Identities = 150/209 (72%), Gaps = 5/209 (2%)
Strand=Plus/Plus
Query 85317 CCGCCGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCGAGACATAGTCGTAG 85376
|||||||||||||||| ||||| ||| ||||||||| ||| |||||||||||| |||
Sbjct 534 CCGCCGTTCGACAGCACCGGCGTTGCGGGCATGAACCACAGGCGCGAGACATAGTCATAG 593
Query 85377 AGCCGCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCGCACTCG-CGCGCGCGAAGGCCTC 85435
| ||||| ||||| ||||||| || || ||| ||| || |||| | ||| ||
Sbjct 594 ATGCGCTGCGCGTGCGCGGCGTCGTCGGCATAGG-CGCTGGCGACGCGGACAAAGAGATC 652
Query 85436 CTGGGGCGAGCTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTCTGAAGGGTGAAGTC 85495
|| | || ||| || |||||||||||||| || | | |||| | ||| ||
Sbjct 653 CT---GATAGGATTCGCCCGGCAGCAGATAGCGGTCCTGCAACGTCTCCTTGCCGAAATC 709
Query 85496 GTCGAGCAGGGCGTCGCGGGTGAGATCGA 85524
| ||||| |||||||| | ||||||
Sbjct 710 GGTCAGCAGCGCGTCGCGCGAATGATCGA 738
>seq1508
Length=2365
Score = 96.9 bits (106), Expect = 5e-15
Identities = 259/387 (67%), Gaps = 23/387 (6%)
Strand=Plus/Minus
Query 82179 CATCAGCAGGGCGAAGGACGAGAAAAGCTGCATCCCCTCGCCGAAGGCCGAGAACACGGC 82238
||| |||| ||||| |||| ||| ||||||| |||||| |||| | ||||| |||
Sbjct 770 CATGAGCATCGCGAACGACGCGAACAGCTGCACGCCCTCGGTGAAGCCGCCGAACATGGC 711
Query 82239 GATGTCGACCATCAGGTCGGCGATCGAGTTGCCGCTGTC----CCGA--TTGAACATGTA 82292
|| | || || ||||| | ||||||| |||| || ||||||
Sbjct 710 GAG------CGTCCGG---GCGATATCCTCATCGCTGTCGACGCCGAAGTTCTGCATGTA 660
Query 82293 CTCGTGCTTTTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGACCTCGGGCAG 82352
|| ||||| || || | | | || |||||||| |||| | ||| || ||||
Sbjct 659 ATCATGCTTGTCCTTCAGCTCGGCATATTCGAGGAACGCGCCATATTCGCTTTCCGGCAT 600
Query 82353 GCCCAGGGTGTCGATCAGCGTCGA-GTAGGCGTCGATGTGGTTGGCCTCGGCGGCGATGA 82411
||| | ||||||| ||| || | |||||| ||||||| | || | | |||
Sbjct 599 GCCGATCGTGTCGAGCAG-GTGGCTGTAGGCCGCGATGTGCACCGTTTCCATGTTGCTGA 541
Query 82412 ACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAG-CGCGGGCCGTACTTCTCGAAG 82470
||||| |||||||||| | || | || ||| ||||| ||||| ||||||
Sbjct 540 ACGCGGTCAGCATCATCTTGATCTCGGTCGGCTTGAACACGCGG-CCGTATTTCTCGTGA 482
Query 82471 TAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTGCGTCAGCAGG 82530
|||| | ||| ||||| || |||||||||||||| ||||||| ||||||||||||
Sbjct 481 TAGCAATCCTGCACCTCGACATCCGCCTGGGTGAAGAAGCGGAAGATCTGCGTCAGCAGG 422
Query 82531 GACTTCTCGT--TCGGCGTCAGCTTCT 82555
||||| ||| ||||||||||
Sbjct 421 TTGCGCTCGTGATCG--GTCAGCTTCT 397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 700402326778440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |