Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_019410.1
Length=221828
Score E
Sequences producing significant alignments: (Bits) Value
seq3208 102 1e-16
seq1508 95.1 2e-14
>seq3208
Length=742
Score = 102 bits (112), Expect = 1e-16
Identities = 150/209 (72%), Gaps = 5/209 (2%)
Strand=Plus/Plus
Query 86726 CCGCCGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCGAGACATAGTCGTAG 86785
|||||||||||||||| ||||| ||| ||||||||| ||| |||||||||||| |||
Sbjct 534 CCGCCGTTCGACAGCACCGGCGTTGCGGGCATGAACCACAGGCGCGAGACATAGTCATAG 593
Query 86786 AGCCGCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCGCACTCG-CGCGCGCGAAGGCCTC 86844
| ||||| ||||| ||||||| || || ||| ||| || |||| | ||| ||
Sbjct 594 ATGCGCTGCGCGTGCGCGGCGTCGTCGGCATAGG-CGCTGGCGACGCGGACAAAGAGATC 652
Query 86845 CTGGGGCGAGCTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTCTGAAGGGTGAAGTC 86904
|| | || ||| || |||||||||||||| || | | |||| | ||| ||
Sbjct 653 CT---GATAGGATTCGCCCGGCAGCAGATAGCGGTCCTGCAACGTCTCCTTGCCGAAATC 709
Query 86905 GTCGAGCAGGGCGTCGCGGGTGAGATCGA 86933
| ||||| |||||||| | ||||||
Sbjct 710 GGTCAGCAGCGCGTCGCGCGAATGATCGA 738
>seq1508
Length=2365
Score = 95.1 bits (104), Expect = 2e-14
Identities = 241/360 (67%), Gaps = 19/360 (5%)
Strand=Plus/Minus
Query 83588 CATCAGCAGGGCGAAGGACGAGAAAAGCTGCATCCCCTCGCCGAAGGCCGAGAACACGGC 83647
||| |||| ||||| |||| ||| ||||||| |||||| |||| | ||||| |||
Sbjct 770 CATGAGCATCGCGAACGACGCGAACAGCTGCACGCCCTCGGTGAAGCCGCCGAACATGGC 711
Query 83648 GATGTCGACCATCAGGTCGGCGATCGAGTTGCCGCTGTC----CCGA--TTGAACATGTA 83701
|| | || || ||||| | ||||||| |||| || ||||||
Sbjct 710 GAG------CGTCCGG---GCGATATCCTCATCGCTGTCGACGCCGAAGTTCTGCATGTA 660
Query 83702 CTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGACCTCGGGCAG 83761
|| ||||| || || | | | || |||||||| |||| | ||| || ||||
Sbjct 659 ATCATGCTTGTCCTTCAGCTCGGCATATTCGAGGAACGCGCCATATTCGCTTTCCGGCAT 600
Query 83762 GCCCAGGGTGTCGATCAGCGTCGA-GTAGGCGTCGATGTGGTTGGCCTCGGCGGCGATGA 83820
||| | ||||||| ||| || | |||||| ||||||| | || | | |||
Sbjct 599 GCCGATCGTGTCGAGCAG-GTGGCTGTAGGCCGCGATGTGCACCGTTTCCATGTTGCTGA 541
Query 83821 ACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAG-CGCGGGCCGTACTTCTCGAAG 83879
||||| |||||||||| | || | || ||| ||||| ||||| ||||||
Sbjct 540 ACGCGGTCAGCATCATCTTGATCTCGGTCGGCTTGAACACGCGG-CCGTATTTCTCGTGA 482
Query 83880 TAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTGCGTCAGCAGG 83939
|||| | ||| ||||| || |||||||||||||| ||||||| ||||||||||||
Sbjct 481 TAGCAATCCTGCACCTCGACATCCGCCTGGGTGAAGAAGCGGAAGATCTGCGTCAGCAGG 422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 709678564256480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |