Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq3934 107 4e-18
seq2228 102 2e-16
>seq3934
Length=413549
Score = 107 bits (118), Expect = 4e-18
Identities = 615/967 (64%), Gaps = 35/967 (4%)
Strand=Plus/Plus
Query 212688 AGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCT 212747
||||| | ||| || || ||| || || ||||||| | ||| |||||| ||||| |
Sbjct 407658 AGATGGATGTTGAGAGATTGAGATTGATCGATGAATGCGCCCCGGTCAGCAGCCATCTGA 407717
Query 212748 ATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGG 212807
||||| || ||||||| |||||||| |||||| ||| |||||| ||| | |||
Sbjct 407718 ATGATGGTCCTTTGGGAGATTTCCCACACTGTCTTGTAGAGAGCTTTGATGTCTGCAGGG 407777
Query 212808 AAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAG--GCGCATGTCCT 212865
| |||||||||||| || || || | || | | ||| | ||||| |
Sbjct 407778 ATATTGGGGATGTTCTGGACTGAACCGCCGTCAGCAATAA--TGCGGTTCTTCATGTTGT 407835
Query 212866 CGTTCCAGAGGCCCCTGGTC-TCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAG 212924
| ||||||| || | || | || ||||| || || ||||| | |||||
Sbjct 407836 CTGACCAGAGG-CCGAGATCAACAAGATCCTTGAGAAGCCATGGATTGACGACTTGGAAT 407894
Query 212925 TCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTG 212984
|| |||| || |||| | ||| | |||||| ||||| ||||| | | ||||||
Sbjct 407895 TCGCCTGCAAGAACCCGGCGAGAGTAGATGTTTGATGTGTATGGCTCAAAACATTCGTTG 407954
Query 212985 TTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTC 213044
|| || ||||| |||||||| || ||||| ||||| || || | |||||| |
Sbjct 407955 AAACCGAGGATCTGACTCGTGCTGGCAGTAGGCATCGGAGCAACAAGTAAACTGTTGCGT 408014
Query 213045 ACTCCGTGCTCGCCGATGAGGCGCC--GAAGCTCTGCCCAGTCCCATCTGCCAGACAGGT 213102
|| ||||| | |||| | | | || | | | |||||||||| | |||
Sbjct 408015 ACACCGTGTTTTGCGAT-ATCCTTCTTGAGGGTGT-CCCAGTCCCAAAGGTCAG------ 408066
Query 213103 CCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCT 213162
||| ||||||||||||| || ||||||| | || || ||||| || |
Sbjct 408067 --TCG-GAGTCACGTTCCACATATCGTACTGCAAAGTACCCTTTGAAACGGGAGAACCTT 408123
Query 213163 GGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGT 213222
|||| || || |||| ||||||| | || || ||||| ||| || || |
Sbjct 408124 CATAAGTTTCATAAGGACCATCAACCTTGGCTATGTCACAAGACGCGGTCAGAGCTGCAT 408183
Query 213223 AGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCA 213282
|||||| ||||| || || | | || | || ||| ||||| || || || ||||
Sbjct 408184 GGTAGATTGTTTCGAAGATTTGAATATTCAACTGCTTTGCCTCAGGCGAGTCAAACGGCA 408243
Query 213283 TCATCATGCG-TTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGT 213341
|| ||| |||| ||||||| || ||||| || || | | || || | ||
Sbjct 408244 ATCGCA-GCGCAAGGAAAGCATCAGCGAGTCCCTGCACACCCACCGCAATAGGACGATGA 408302
Query 213342 CTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTG 213401
| | |||| ||| | || | ||| || ||| ||| |||||||||||
Sbjct 408303 CGGAAGTTACTCTTCCTGGCTTCTGGGACGGGATAGTGATTGTTGTCAATGATCTTGTTT 408362
Query 213402 AGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTA--CTCGTGATTGAACACGTAGC 213459
| |||| | |||| ||||| | || | | ||| | | || | ||
Sbjct 408363 AAGTTGAGAACAAGGACTTGTGTGACTT----CATGCAATCTCCCAAAGTCATAC-TCGC 408417
Query 213460 CCCCGTC---CTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCT 213516
||| | | | ||| | |||| || | | |||| |||||||| || || |
Sbjct 408418 CCCGGACAGGATCGACATATGTGGGCAAAGCAAGGGACGCCAAATTGCAAACTGCGACTT 408477
Query 213517 CCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCA 213576
| | | | |||||||| ||||| || ||||||| |||| || || || || || |
Sbjct 408478 CGTCCGGCGCGGTGTACTCGATGATTTCCGTGCACAAGTTGGAGCTCCGAATAGTTCCAA 408537
Query 213577 GGTTCTGGTGGTTTGACT-TTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCC 213634
|||| | ||||| ||| ||||| | ||| | ||| || || |||||| ||||| |||
Sbjct 408538 GGTTTTTTTGGTT--ACTCTTGCGGTTGCACGCATCTTTATAAAGCATGAAGGGGTTCCC 408595
Query 213635 GGTCTCT 213641
||||||
Sbjct 408596 AGTCTCT 408602
Score = 95.1 bits (104), Expect = 2e-14
Identities = 196/286 (69%), Gaps = 7/286 (2%)
Strand=Plus/Plus
Query 213780 GGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGAC 213838
||||| | | | |||| || |||| | |||| || | || ||||||||| || |||
Sbjct 408790 GGACAAAACAAGGTCCAATCGCCGTTCTTCTCA-ACCCGCTTCATGAACAGATCGGGGGT 408848
Query 213839 CCACAGCGCGGTGAACAGGTCCCTGG-TCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCA 213897
||| || || ||| || || | || || | || || ||| ||| |||||| || |
Sbjct 408849 CCAAAGAGCAAGGAAGAGATCACGGGCTCTTACT-TCCTCCTTTCCGTGGTTTTTACGGA 408907
Query 213898 GATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG 213957
|||||| ||| || ||||| || | |||||| || || | || |||||||||||||| |
Sbjct 408908 GATCTAAAAACTCGAAGATATCGGAGTGCCAAGGTTCAAGATAAATGGCAAAGGCGCCAG 408967
Query 213958 GCC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGG 214014
||| | ||||| || ||||| || | || |||| |||| || || | ||
Sbjct 408968 GCCGTTTGTTGCCACCTTGGTCGACATATCGAGCTGTATTGTTAAAGACACGGAGCATGG 409027
Query 214015 GTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCC 214060
| || | ||||| || ||||| ||||| || || || |||||
Sbjct 409028 GGACGATTCCGTTAGAGGAGCCGTTTGTTCCTGCAATGTAGGAGCC 409073
>seq2228
Length=283306
Score = 102 bits (112), Expect = 2e-16
Identities = 173/250 (69%), Gaps = 3/250 (1%)
Strand=Plus/Minus
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
|||| ||||| | ||||| || ||||||||| ||||||||| | |||||| |
Sbjct 201245 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGGGCCTCTGGAA 201186
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
||| ||||| | || | ||| || ||||| || ||||| || || || ||||| |
Sbjct 201185 TCTGAACTTCGCCGCTAAAGCGCTCAAGAAGATTTTCGTTGACGATGCCGTCGGAAGCGG 201126
Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCC 48605
|||||||||| | ||||| | ||| | ||| || | || | | || ||||||
Sbjct 201125 CAAAGAAGGCCAACACATGAGAGATGAAGTAGCGTTCATCGTCATTTAGTCGATCATTCC 201066
Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665
|| | || | ||||||| || || | ||||| | |||||||||||||| || |
Sbjct 201065 AGTCGTGAAGGTCTTTGGACAAATCGATCTCTTCGGCGGTCCAGAAGGACGCCTCGGCCT 201006
Query 48666 TTTTGTACAT 48675
| ||||||||
Sbjct 201005 TCTTGTACAT 200996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931476314179840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |