Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq3711 107 6e-19 >seq3711 Length=1691 Score = 107 bits (118), Expect = 6e-19 Identities = 327/503 (65%), Gaps = 12/503 (2%) Strand=Plus/Plus Query 45521 GTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACGGATTCCCGCTCGTGACGACGAAA 45580 ||||||||| ||| |||| || || || | || || |||||||| ||||| || || Sbjct 1190 GTGTTCGGCTACCAGATGCGGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAG 1249 Query 45581 AAGTTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAAT 45640 ||| | || | || ||||| | || ||||| ||||| | | ||| | | Sbjct 1250 AAGGTCCACCTGAAATCCATCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGAC 1309 Query 45641 GTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGC 45700 | | ||| ||| || ||||| || |||||||| ||||| || ||||| Sbjct 1310 AACAACAAGCTGCGCGAGCGCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGACGGC 1369 Query 45701 GATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGTGG---AAAGGGGCTGACGGGAAA 45757 || || || || | ||||||| ||| ||||| ||| | | | | |||| | Sbjct 1370 GACCTGGGGCCGGTGTACGGCGTGCAGTGGCGCAGCTGGCCGACACCCGACGGCGGGCAC 1429 Query 45758 ACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAGCGCAACCCGAACTCGCGGCGG 45817 | ||||||| || || | | | ||| |||||| ||| ||| ||||||| || Sbjct 1430 A---TCGACCAGATCGCCGAAGCGGTGAAGACCATCAAGGCCAATCCGGACTCGCGCCGC 1486 Query 45818 TTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAATGAAGTTGCCCCCATGTCAT 45877 | | || ||||| ||||||||||| | | | | ||| | || | || || | Sbjct 1487 ATCATCGTCAGCGCCTGGAACGTGGCGGACATCCCGAAGATGGCGCTGGCGCCCTGCC-- 1544 Query 45878 TACGC---CTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCATGCATGTGGCAACAGCGT 45934 |||| ||| ||||| ||||||||| | ||| | |||| ||| | | | ||||| Sbjct 1545 -ACGCGTTCTTCCAGTTCTACGTCGCGGACGGCAAGCTGTCGTGCCAGCTGTACCAGCGC 1603 Query 45935 TCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCTGTTGACACAT 45994 || ||| | || || || ||||||| |||||||| ||||| ||||| | || || Sbjct 1604 AGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCAGCTACGCGCTACTCACGCAC 1663 Query 45995 ATGGTTGCCCAACAATGCGACCT 46017 ||| | || || || |||||||| Sbjct 1664 ATGATCGCGCAGCAGTGCGACCT 1686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157741312689614