Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq3711 105 1e-17 >seq3711 Length=1691 Score = 105 bits (116), Expect = 1e-17 Identities = 164/235 (70%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 122424 GTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAAAAG 122483 |||| |||||| ||| | ||| ||||| || ||||| || |||||| | | | Sbjct 1173 GTACCGGCACGCGCAGCGTGT------TCGGCTACCAGATGCGGTTCGACCTGAACGATG 1226 Query 122484 GTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCTGT 122543 | ||||||||||| || ||||| ||||| ||||| ||||||||||| ||||| |||| Sbjct 1227 GCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCACGAGCTGCTGT 1286 Query 122544 GGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTGGG 122603 ||||||| |||| | | ||| | | | ||| || | ||| | ||||||| Sbjct 1287 GGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTGACCATCTGGG 1346 Query 122604 ATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 | |||||||| || || || | || || ||||||||||| ||| ||||| Sbjct 1347 ACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTGCAGTGGCG 1401 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 123072 TGTCCTGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATTG 123131 |||| || |||||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| | Sbjct 1581 TGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATCG 1640 Query 123132 CCTCTTACGCGCTCCTGATACACATGTTTGCCCAGCAG 123169 || |||||||| || | |||||| | || |||||| Sbjct 1641 CCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAG 1678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777584846339600