Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1411 87.8 2e-12 >seq1411 Length=471115 Score = 87.8 bits (96), Expect = 2e-12 Identities = 174/256 (68%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 |||||| |||||||| || ||||| || ||||| |||||||| || || ||||| || Sbjct 145907 AATGGTCGGAGATGTTCGGCGACACCGATGGGACCAACGCCAGGCCCACCGCCTCCGTGA 145966 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281 |||||||| || || || || | || || || |||||||| || ||| || | ||| Sbjct 145967 GGAATACAAAAGGTTTTGTGAAGGTTAAGGTGGCATACATCGGCTCCAATTTCTCCGGGT 146026 Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341 ||||| | || || || | || ||||| || | ||| ||||| || || | Sbjct 146027 GAGCAAAGACCGATTTGCGCGTTCATGTTGGCACCGTCCATATACACCTGGCCGCCGTAT 146086 Query 138342 TCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACC--ATGAGTCGATG 138399 | || || | || ||| | | | ||| | | ||||| || || ||| | | | Sbjct 146087 TTGTGGACAACCTCACAAACTTCCTTAATGGTGGGCTCAAAAACGCCGAATGTGCTG--G 146144 Query 138400 GATATGTAATCATAAT 138415 |||| ||||||||||| Sbjct 146145 GATAGGTAATCATAAT 146160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578963290984520