Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq3060 134 2e-26
>seq3060
Length=205498
Score = 134 bits (148), Expect = 2e-26
Identities = 172/237 (73%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||| | || ||||| || ||||||| ||||| |||||| ||| ||
Sbjct 122890 AATTTGCATACCACCGCGTAAGCGAAGGACGAGATGCAGTGTAGACTCTTTCTGAATGTT 122831
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| |||| ||| | | || || | ||||| ||||||||||| || | ||| ||
Sbjct 122830 GTAGTCTGATAGCGTGCGACCGTCCTCGAGCTGTTTGCCGGCAAAAATCAAACGCTGCTG 122771
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
|| || || ||||| || || ||||| || || ||||| | || || || || ||
Sbjct 122770 GTCTGGTGGAATTCCCTCCTTGTCTTGAATCTTAGTTTTGACGTTGTCGATTGTGTCTGA 122711
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||||| ||||| || || || ||||| || || | || || ||||| || |||||
Sbjct 122710 AGACTCTACTTCAAGCGTGATTGTTTTTCCGGTCAAGGTCTTCACAAAAATCTGCAT 122654
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| ||||| ||||| | || | | ||| || | || ||||| ||||| || | || |
Sbjct 123063 ATGTTATAATCGGAGAGTGTCCGACCATCCTCAAGCTGCTTTCCAGCAAAGATGAGTCGC 123004
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
||||| || || || || |||||||||||||| ||||| || || | || || ||
Sbjct 123003 TGTTGGTCGGGTGGGATACCTTCTTTATCTTGAATTTTCGTCTTAACGTTGTCGATCGTG 122944
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|| || ||||| || || | || ||||| || || |||| || || ||||| ||||||
Sbjct 122943 TCTGACGACTCGACCTCCAATGTAATAGTCTTGCCGGTTAATGTCTTAACAAAAATTTGC 122884
Query 193359 AT 193360
||
Sbjct 122883 AT 122882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899599847206320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |