Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3060 134 2e-26 >seq3060 Length=205498 Score = 134 bits (148), Expect = 2e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | || ||||| || ||||||| ||||| |||||| ||| || Sbjct 122890 AATTTGCATACCACCGCGTAAGCGAAGGACGAGATGCAGTGTAGACTCTTTCTGAATGTT 122831 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| |||| ||| | | || || | ||||| ||||||||||| || | ||| || Sbjct 122830 GTAGTCTGATAGCGTGCGACCGTCCTCGAGCTGTTTGCCGGCAAAAATCAAACGCTGCTG 122771 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || ||||| || || ||||| || || ||||| | || || || || || Sbjct 122770 GTCTGGTGGAATTCCCTCCTTGTCTTGAATCTTAGTTTTGACGTTGTCGATTGTGTCTGA 122711 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||| ||||| || || || ||||| || || | || || ||||| || ||||| Sbjct 122710 AGACTCTACTTCAAGCGTGATTGTTTTTCCGGTCAAGGTCTTCACAAAAATCTGCAT 122654 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || ||||| ||||| | || | | ||| || | || ||||| ||||| || | || | Sbjct 123063 ATGTTATAATCGGAGAGTGTCCGACCATCCTCAAGCTGCTTTCCAGCAAAGATGAGTCGC 123004 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||| || || || || |||||||||||||| ||||| || || | || || || Sbjct 123003 TGTTGGTCGGGTGGGATACCTTCTTTATCTTGAATTTTCGTCTTAACGTTGTCGATCGTG 122944 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || || ||||| || || | || ||||| || || |||| || || ||||| |||||| Sbjct 122943 TCTGACGACTCGACCTCCAATGTAATAGTCTTGCCGGTTAATGTCTTAACAAAAATTTGC 122884 Query 193359 AT 193360 || Sbjct 122883 AT 122882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899599847206320