Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq3060 105 1e-17 >seq3060 Length=205498 Score = 105 bits (116), Expect = 1e-17 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| |||| ||||| || || || ||||||||||| || ||||| || Sbjct 122882 ATGCAAATTTTTGTTAAGACATTAACCGGCAAGACTATTACATTGGAGGTCGAGTCGTCA 122941 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| || | ||||| |||||||||||||| || || || || ||| Sbjct 122942 GACACGATCGACAACGTTAAGACGAAAATTCAAGATAAAGAAGGTATCCCACCCGACCAA 123001 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| || |||||||| || ||| | || | || ||||||| Sbjct 123002 CAGCGACTCATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGGACACTCTCCGATTATA-- 123059 Query 156003 ATATCCA-AAG--AGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 | ||||| ||| | || || || ||||| || || ||||| | ||||| Sbjct 123060 ACATCCAGAAGGAAAGC-ACTCTGCATTTGGTATTGAGATTGCGCGGCGG 123108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731827621111600