Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq3060 122 2e-22
>seq3060
Length=205498
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384
||||| ||||| | ||| || || ||| |||||||| || | ||| || ||||
Sbjct 123093 AATACCAAATGCAGAGTGCTTTCCTTCTGGATGTTATAATCGGAGAGTGTCCGACCATCC 123034
Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444
|| | || || ||||||||||| | || |||||| || ||||| || ||||||||||||
Sbjct 123033 TCAAGCTGCTTTCCAGCAAAGATGAGTCGCTGTTGGTCGGGTGGGATACCTTCTTTATCT 122974
Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504
|| ||||| | || || || || | |||||||| || || || | ||||| ||
Sbjct 122973 TGAATTTTCGTCTTAACGTTGTCGATCGTGTCTGACGACTCGACCTCCAATGTAATAGTC 122914
Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || |||||||| |||| ||| || |||||
Sbjct 122913 TTGCCGGTTAATGTCTTAACAAAAATTTGCAT 122882
Score = 96.9 bits (106), Expect = 7e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||||| ||||| | || | ||| | ||||| || || ||| |||||||||
Sbjct 122655 ATACCACCTCGGAGACGGAGGACAAGATGGAGAGTAGATTCCTTTTGGATGTTATAATCA 122596
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| || | |||||| ||||| || || || | || ||||| ||
Sbjct 122595 GAGAGAGTGCGACCATCCTCAAGTTGTTTGCCAGCGAAAATCAAGCGTTGCTGATCTGGA 122536
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || ||||| || || || |||| || ||| || | ||| || |||||
Sbjct 122535 GGGATGCCCTCCTTATCCTGAATCTTGGTTTTCACGTTATCGATGGTATCGGAGGATTCA 122476
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGT 192512
|| || ||||| || || || || ||
Sbjct 122475 ACCTCGAGAGTGATAGTCTTTCCCGT 122450
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | ||| || | || || || | |||| || || ||| || |||||
Sbjct 122363 ATACCACCACGAAGGCGGAGAACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCC 122304
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| || | ||||||||||| ||||| || | || || |||||
Sbjct 122303 GAAAGAGTACGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGA 122244
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| || || | || ||||| |||| ||| || ||
Sbjct 122243 GGGATTCCCTCCTTGTCTTGGATCTTTGTCTTCACATTGTCGATAGTATCACCGGACTCA 122184
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || ||||| || || || | ||| ||||||||
Sbjct 122183 ACCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAAATCTGCAT 122134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984418811183850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |