Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3060 122 2e-22 >seq3060 Length=205498 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384 ||||| ||||| | ||| || || ||| |||||||| || | ||| || |||| Sbjct 123093 AATACCAAATGCAGAGTGCTTTCCTTCTGGATGTTATAATCGGAGAGTGTCCGACCATCC 123034 Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444 || | || || ||||||||||| | || |||||| || ||||| || |||||||||||| Sbjct 123033 TCAAGCTGCTTTCCAGCAAAGATGAGTCGCTGTTGGTCGGGTGGGATACCTTCTTTATCT 122974 Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504 || ||||| | || || || || | |||||||| || || || | ||||| || Sbjct 122973 TGAATTTTCGTCTTAACGTTGTCGATCGTGTCTGACGACTCGACCTCCAATGTAATAGTC 122914 Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || |||||||| |||| ||| || ||||| Sbjct 122913 TTGCCGGTTAATGTCTTAACAAAAATTTGCAT 122882 Score = 96.9 bits (106), Expect = 7e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| ||||| | || | ||| | ||||| || || ||| ||||||||| Sbjct 122655 ATACCACCTCGGAGACGGAGGACAAGATGGAGAGTAGATTCCTTTTGGATGTTATAATCA 122596 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | |||||| ||||| || || || | || ||||| || Sbjct 122595 GAGAGAGTGCGACCATCCTCAAGTTGTTTGCCAGCGAAAATCAAGCGTTGCTGATCTGGA 122536 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || ||||| || || || |||| || ||| || | ||| || ||||| Sbjct 122535 GGGATGCCCTCCTTATCCTGAATCTTGGTTTTCACGTTATCGATGGTATCGGAGGATTCA 122476 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGT 192512 || || ||||| || || || || || Sbjct 122475 ACCTCGAGAGTGATAGTCTTTCCCGT 122450 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| || | || || || | |||| || || ||| || ||||| Sbjct 122363 ATACCACCACGAAGGCGGAGAACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCC 122304 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | ||||||||||| ||||| || | || || ||||| Sbjct 122303 GAAAGAGTACGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGA 122244 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| || || ||||| || || | || ||||| |||| ||| || || Sbjct 122243 GGGATTCCCTCCTTGTCTTGGATCTTTGTCTTCACATTGTCGATAGTATCACCGGACTCA 122184 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || ||||| || || || | ||| |||||||| Sbjct 122183 ACCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAAATCTGCAT 122134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984418811183850