Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq3296 129 2e-25 seq3761 127 7e-25 >seq3296 Length=739 Score = 129 bits (142), Expect = 2e-25 Identities = 353/535 (66%), Gaps = 17/535 (3%) Strand=Plus/Plus Query 3419 CTCCAGCCGGGCGACGAGATCGTCCTCGGCTTCGACGGTGGCAAGACCCACGACGCGACC 3478 || ||||| |||||| |||||| |||| |||||||| |||||||| |||||||||| Sbjct 157 CTTCAGCCCGGCGACACCATCGTCATCGGGTTCGACGGCGGCAAGACAGACGACGCGACA 216 Query 3479 GCCCTTGTGGCGATCCGCGTCCGGGACATGGCCGCCTTCCTGCTGGGTCTCTGGGAGAAG 3538 || | | || | |||||| ||| | ||| | ||| || ||||||||||| Sbjct 217 GCGATCATCGCTCTTCGCGTCGCCGACCGGCTCGCGCAGCCGCTCGGGATCTGGGAGAAG 276 Query 3539 CCGGACGGACCCCAGGGTGAGAACTGGGAGGTCCCTCGCTGGGAGGTCGACTCCGAG--- 3595 || || || || | || |||||||||||||| | || | || | |||| Sbjct 277 CCCGAGGGCCCTCTCGGCAAGAACTGGGAGGTC---GACAGGATCGCCGTCGGCGAGCTC 333 Query 3596 GTGCACAGCGCCTTCAAGCAGTTCAAGGTCCAGGCGTTCTACGCCGACGTTGCGCTGTGG 3655 || | ||||||| | || | | ||| | |||| ||||||||| ||| ||| Sbjct 334 GTCGAGCACGCCTTCGGGACGTACGACGTCGTCGGCTTCTTCGCCGACGTCAAGCTCTGG 393 Query 3656 GAGTCCTACATCTCCGAGTGGTCGGAGACCTACGGTGACGGCCTTGCGGTGAAGTCG-CC 3714 |||||||||||| | |||||||||| |||| ||| | || ||||||| || || Sbjct 394 GAGTCCTACATCGACACCTGGTCGGAGAAGTACGCCGACCGGCTCCTGGTGAAGGCGACC 453 Query 3715 GGTCGGTCGCGACGCGATCGGCTTCGACATGCGC-TCCTC--GCTGAAGCTCGTGACCAT 3771 ||||| || |||||| |||||||||| || | || | ||||| |||| Sbjct 454 CCGAAGTCGC----CGGTCGGCTACGACATGCGCGGCCACCAGCAGGAGCTC---ACCAA 506 Query 3772 GGCGCACGAGCGCCTGATGCGCTCCATCTTCGACGGCAAGCTCGCCCACGACGGCGACCG 3831 ||| ||| ||| | | | ||| ||| || || ||| || | | Sbjct 507 GGCCACCGAAGCCCTCGTCCAGGCGATCGAGGACCAGCAGATCCGGCACACCGACCATGC 566 Query 3832 CTCGCTGCGTCGCCACGCGCTGAACGCACGTCGGCGAACGAACAACTACGGCGTCTCCTT 3891 | ||||| || |||| |||| || ||||| | ||| | |||||| ||| Sbjct 567 CGCGCTGAACCGGCACGTCGGGAACTGCCGCCGGCGCCCCAACCGGTGGGGCGTCAGCTT 626 Query 3892 CGGCAAGGAGTCCAGAGAGTCGCCTCGCAAGGTCGACGCCTACGCGGCGCTGATG 3946 ||||||||| ||||| |||||||| |||||||||| || ||||||| || || Sbjct 627 CGGCAAGGAATCCAGGGAGTCGCCGAAGAAGGTCGACGGCTTCGCGGCGTTGCTG 681 >seq3761 Length=1757 Score = 127 bits (140), Expect = 7e-25 Identities = 169/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 40419 CCGTACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATC 40478 ||| | ||||||||||| ||| ||| |||||||| | ||||||| ||| Sbjct 697 CCGAAGGTCGCGATCTGGCTGACGGCCTCGCGGCCGTACTTGTCCTTCACGTACTCGATG 638 Query 40479 ACCTCGCCACGAC--GCCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCT 40536 ||| | | || ||| | || |||||||||||||| || ||||| |||||||||| Sbjct 637 ACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGCGCT 580 Query 40537 CGGGGTTCAGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGTCGAGGTCGGTGATCC 40596 | ||||||||||| |||||||| | || || || || || ||||||||||||||| Sbjct 579 CCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGATCT 520 Query 40597 CGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACC 40649 ||| ||||| |||||||| ||||| | || || || || ||||||||| Sbjct 519 TGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACC 467 Score = 98.7 bits (108), Expect = 3e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 39539 CTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCTGACC 39598 || ||||| |||||| |||||||||||||||||||||||| |||||||| || || Sbjct 1622 CTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCGCCGCC 1563 Query 39599 GAGGGTGTACCCGGCCATGACCTGCGCAACCTTCTGCACCTGCTCCTGGTAGATGATGA 39657 || ||||| ||| ||| || |||||| || | |||||| |||||||||| |||| Sbjct 1562 CAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACCATGA 1504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163875359313668