Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_021538.1 Length=59626 Score E Sequences producing significant alignments: (Bits) Value seq4176 224 4e-54 >seq4176 Length=744 Score = 224 bits (248), Expect = 4e-54 Identities = 292/397 (74%), Gaps = 14/397 (4%) Strand=Plus/Plus Query 46595 CCGTTCTCCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACAAC 46654 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 3 CCGTTCAGCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGAT 62 Query 46655 AACGAGCACTTCTGGCAGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCTCG 46714 ||| ||| |||| ||||||||| | || || ||| | ||||| || || || Sbjct 63 GACGGGCATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCG 122 Query 46715 CCGGGCCGTATCTACGCCTG---CCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACC 46771 |||||||| | |||||| |||||| |||||||| ||| ||||||| || ||| Sbjct 123 CCGGGCCGGCT---CGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACC 179 Query 46772 GGCGCCGGCGTGCCCACGGTGTCACCCTTCCACGCCGAGGCGATCTTCCAC-GGACGCAA 46830 |||| || ||||| || || || ||||||||| || ||| ||| | || Sbjct 180 GGCGAGGGTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGC-G 238 Query 46831 ACACGGCTTCGACTACCTCGGCATGATCACCGTCATCACCGATGTGGTCCGGGAAAACAA 46890 ||||||||| | | | | ||||||||||||||| ||||||| || || || || ||||| Sbjct 239 CCACGGCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAA 298 Query 46891 CCAGACGTACCGGCTGGGCTGGT-CAGAGCAGTGC--AAAGACGCCACCAAGATGGGCGT 46947 |||||| ||||| ||| | || ||| | ||| || |||| ||| ||||||||| Sbjct 299 CCAGACCTACCGCCTG---TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTG 355 Query 46948 CGGCTCCCCGGAATACATTCTGTTGTTCCACAAACCG 46984 |||| ||| |||||| | ||| || | | ||| ||| Sbjct 356 CGGCAGCCCCGAATACGTGCTGCTGATGCGCAAGCCG 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190670615667256