Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_021560.1 Length=53102 Score E Sequences producing significant alignments: (Bits) Value seq4176 95.1 4e-15 >seq4176 Length=744 Score = 95.1 bits (104), Expect = 4e-15 Identities = 172/249 (69%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 39164 TCCCGTTTTCCACCCAATACGAGTATTCGCCGAACTATGCCGACTTCGGTCATACCGAAG 39223 ||||||| || ||| |||||||| |||||| ||| ||||||||| || || || | Sbjct 1 TCCCGTTCAGCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACG 60 Query 39224 ACAATGAGCATTTCTGGCAGCAGATGGATTTCCTCATCCCCGAAT-TGCTGCGGGTTCTG 39282 | | | |||||||| |||||||||| || | | ||||| |||| || | ||| Sbjct 61 ATGACGGGCATTTCTTCGCGCAGATGGATCATCTGA-CGCCGAACCTGCTCCGTGCGCTG 119 Query 39283 GCGCCGGGGCGTGTCGCCGCAATCCATGTGAAGGATCGCATCGTTCCCGGGGGTATGACG 39342 |||||||| || ||||| ||||| |||||||| || ||| | ||| | |||| Sbjct 120 GCGCCGGGCCGGCTCGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACC 179 Query 39343 GGTCTGGGGTTTCAAACCGTCTACCCGTTCTCCGACGATTGCATCGCCCGTTTCAAGCGG 39402 || ||| | | |||||| | |||||| || | | ||||||| | | | ||| Sbjct 180 GGCGAGGGTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC 239 Query 39403 CACGGGTTC 39411 ||||| ||| Sbjct 240 CACGGCTTC 248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169795018288368