Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3060 138 1e-27 >seq3060 Length=205498 Score = 138 bits (152), Expect = 1e-27 Identities = 173/231 (75%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || ||||||| || |||||||| | || || || | | Sbjct 122882 ATGCAAATTTTTGTTAAGACATTAACCGGCAAGACTATTACATTGGAGGTCGAGTCGTCA 122941 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| || ||| || ||||| |||||||| || || ||||| || Sbjct 122942 GACACGATCGACAACGTTAAGACGAAA-ATTCAAGATAAAGAAGGTATCCCACCCGACCA 123000 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTAT 24880 ||| || | |||||||| || || ||||| |||||| ||| || || | || |||||| Sbjct 123001 ACAGCGACTCATCTTTGCTGGAAAGCAGCTTGAGGATGGTCG-GACAC-TCTCCGATTAT 123058 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| || |||||| || || || ||||| ||| |||||||||| ||| Sbjct 123059 AACATCCAGAAGGAAAGCACTCTGCATTTGGTATTGAGATTGCGCGGCGGC 123109 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 ||||||||||| ||| | || || | || || || || || || || || || || || Sbjct 122131 ACGATGCAGATTTTTGTCAAGACTTTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCC 122190 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 || || | || | || || ||||||||||||||| || ||||| ||||| || Sbjct 122191 GGTGATACTATCGACAATGTGAAGACAAAGATCCAAGACAAGGAGGGAATCCCTCCTGAC 122250 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || ||||| |||||||| || || |||||||| || ||| | | | || ||||| Sbjct 122251 CAGCAACGCTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGTACTCTTTCGGATTAC 122310 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || |||||||| || || |||||||| Sbjct 122311 AACATCCAGAAGGAATCTACCCTTCACTTGGT 122342 Score = 105 bits (116), Expect = 6e-18 Identities = 142/194 (73%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AAC 24777 || || || || || || ||||| || ||||| || ||| || |||| || | || ||| Sbjct 122441 AAGACTCTCACGGGAAAGACTATCACTCTCGAGGTTGAATCCTCCGATACCATCGATAAC 122500 Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837 | ||||| || ||| || || || || || || ||||| ||||| ||||| ||||| || Sbjct 122501 GTGAAAACCAA-GATTCAGGATAAGGAGGGCATCCCTCCAGATCAGCAACGCTTGATTTT 122559 Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897 || || ||||| || |||||| | | | || ||||||||||| ||||||||||| Sbjct 122560 CGCTGGCAAACAACTTGAGGATGGTCGCACTCTCTCTGATTATAACATCCAAAAGGAATC 122619 Query 24898 GACACTACA-CTTG 24910 || || || |||| Sbjct 122620 TACTCTCCATCTTG 122633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449870319334280