Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq4676 158 6e-34 seq2129 105 3e-18 >seq4676 Length=1063 Score = 158 bits (174), Expect = 6e-34 Identities = 206/285 (72%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 68072 GAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGC 68131 |||||||||||||| || || || ||| |||||||| || ||||| |||| ||||| Sbjct 58 GAGACCACCACCGGCGGCAATGCGCTGAAGTTCTACGCGTCCGTGCGCCTGGACATCCGC 117 Query 68132 AGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTT 68191 | | || |||| ||| | ||||| ||||| |||||||| || || ||||| Sbjct 118 CGCACCGGCACCATCAAGAAGGGCGAGGAGGCGATCGGCAACGAGACCAAGGTCAAGGTC 177 Query 68192 GTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAG 68251 |||||||||||| ||||||| ||| | ||| ||||| |||| | | ||||||| Sbjct 178 GTCAAGAACAAGGTGGCGCCCCCGTTCAAGACGGCGGAGTTCGACATCCTGTTCGGCGAG 237 Query 68252 GGCATTTCCCGCGAGGCCGAACTCCTCGACATGGCCGTTTCCCGAGGGCTCATCAAGAAG 68311 ||||| || ||||| | ||| || ||||||||| ||| | | ||||| ||||| Sbjct 238 GGCATCTCGCGCGAAGGCGAGGTCATCGACATGGGCGTCAACGCCCGCATCATCGAGAAG 297 Query 68312 TCTGGGGCCTGGTTCAAGTACGGGGACAAGAACATCGGCCAGGGC 68356 || || ||||||| | ||| || | |||| |||||||||||| Sbjct 298 TCCGGCGCCTGGTACGCCTACAAGGGCGAGAAGATCGGCCAGGGC 342 >seq2129 Length=790 Score = 105 bits (116), Expect = 3e-18 Identities = 177/256 (69%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 68078 ACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATC 68137 |||||||| || || || ||| |||||||| || || ||| | || || ||| | ||| Sbjct 790 ACCACCGGCGGCAATGCGCTGAAATTCTACGCGTCCGTCCGTCTCGACGTGCGCCGCATC 731 Query 68138 GCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAG 68197 | | | | ||||| |||| || || |||||||| || ||||||||||| || ||| Sbjct 730 GGCTCGGTCAAGGACCGCGAGGAAGCGACCGGCAACCAGACCCGCGTGAAGGTGGTGAAG 671 Query 68198 AACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATT 68257 |||||| | ||||| ||| | |||| || || |||| | | ||| ||||||||| Sbjct 670 AACAAGGTCGCGCCGCCGTTCAAGCAGGTCGAATTCGACATCATGTTCGGTGAGGGCATT 611 Query 68258 TCCCGCGAGGCCGAACTCCTCGACATGGCCGTTTCCCGAGGGCTCATCAAGAAGTCTGGG 68317 ||| || ||| || ||||| | | ||| || || || ||||||| || Sbjct 610 TCCAAGCTGGGCGAGATCATCGACCTCGGCGTGAAGGCCGGCCTGGTCGAGAAGTCGGGC 551 Query 68318 GCCTGGTTCAAGTACG 68333 ||||||||| |||| Sbjct 550 TCCTGGTTCAGCTACG 535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247434970393008