Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_022060.1 Length=54314 Score E Sequences producing significant alignments: (Bits) Value seq4176 250 9e-62 >seq4176 Length=744 Score = 250 bits (276), Expect = 9e-62 Identities = 298/399 (75%), Gaps = 18/399 (5%) Strand=Plus/Plus Query 41025 CCGTTCTCCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGAC 41084 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3 CCGTTCAGCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGAT 62 Query 41085 AACGCGCATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCG 41144 ||| |||||||| ||||||||||| | || || ||| | ||||| || || ||| Sbjct 63 GACGGGCATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCG 122 Query 41145 CCGGGCCGTATCTACGCCTG---CCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACC 41201 |||||||| | |||||| |||||| |||||||| ||| ||||||| || ||| Sbjct 123 CCGGGCCGGCT---CGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACC 179 Query 41202 GGCGCCGGCGTGCCCACAGTGTCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGC 41258 |||| || ||||| || || |||||||||||| || ||| ||| ||| Sbjct 180 GGCGAGGGTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC 239 Query 41259 AAACACGGCTTCGACTACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAAC 41318 ||||||||| | | | | |||||||||||||| |||||||| || ||||| || ||| Sbjct 240 ---CACGGCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAAC 296 Query 41319 AACCAGACGTACCGGCTGGGCTGGT-CGGAGCAGTGC--AAAGACGCCACCAAGATGGGT 41375 |||||||| ||||| ||| | || | | | ||| || |||| ||| |||||||| Sbjct 297 AACCAGACCTACCGCCTG---TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGC 353 Query 41376 GTCGGCTCCCCGGAATACATTCTGCTGTTCCACAAACCG 41414 |||| ||| |||||| | |||||| | | ||| ||| Sbjct 354 TGCGGCAGCCCCGAATACGTGCTGCTGATGCGCAAGCCG 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 173673194870712