Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3934 107 3e-17 seq4417 98.7 2e-14 seq1079 91.5 2e-12 >seq3934 Length=413549 Score = 107 bits (118), Expect = 3e-17 Identities = 178/257 (69%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||||||||| || || || | ||||||||| ||||||||||| || | ||||| || Sbjct 408985 TGGTCGACATATCGAGCTGTATTGTTAAAGACACGGAGCATGGGGACGATTCCGTTAGAG 409044 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 |||||| || || || | ||||| ||| | ||||| | || || ||| Sbjct 409045 GAGCCGTTTGTTCCTGCAATGTAGGAGCCAGTCGCGCGAATACGATGGATATTAAGACCG 409104 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || ||||| || | |||||| || || ||||| | || || || |||||||| || ||| Sbjct 409105 ATACCGCCAGCTGTCTTGGAAATCAGAGCGCAGGTCTTTAGAGTATCGTAGATACCATCG 409164 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || || ||||||| || | ||||| || || | | || || ||| || || Sbjct 409165 ATGCTATCTTCCTTCATATCAATGAGAAAACAGGAGGCCATCTGTGGTTGCGGTGTTCCC 409224 Query 2073781 GCATTGAAGAGCGTGGG 2073797 || ||||| || ||||| Sbjct 409225 GCGTTGAAAAGAGTGGG 409241 >seq4417 Length=643678 Score = 98.7 bits (108), Expect = 2e-14 Identities = 306/465 (66%), Gaps = 18/465 (4%) Strand=Plus/Minus Query 2411501 GCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGT 2411560 |||| | || |||||||| ||||| || ||||| ||||| || || ||| | || | Sbjct 225102 GCGCGAGGGTGAAGATCTTTCGCTGATCAACGCCGCCGAACTGCGCATCCACGCCCAGAT 225043 Query 2411561 GCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTG--AGCGGCGGGTTGCG 2411618 | | ||||| ||||||||||| |||||||||| |||| ||| ||||| | || Sbjct 225042 GTTCTTCGTCCAGGGCCTGCATAAGCGGGTAGATGAGG--CCTGACAGCGGTGCATTATC 224985 Query 2411619 GTCCATCTTGACCACCTGGGCGGCGGCCTTTT--GCGCCGTGCCGACGGTCACG-CGCGC 2411675 | || ||| ||||||| ||| ||||||||| || ||||| |||| ||| ||| Sbjct 224984 GACCTGCTTCACCACCTCGGCACCGGCCTTTTTGGCATCGTGC--TCGGTTACGACGCTG 224927 Query 2411676 CGTCAGGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCAC 2411735 | |||| || ||||| || | ||||| ||| | ||||| ||||| || Sbjct 224926 C-TCAGTCGGAAGAGATCCATGGTGTATTTGGCTGATAGTTGGTAGGAACTGCCCAAGAC 224868 Query 2411736 AAATTCGAGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAA--- 2411792 ||| ||||| ||| |||||| | | || ||||| ||| |||||| | | Sbjct 224867 AAACTCGAGTTTCTCCGTCGGGACATTGACGGCCTCGAGCAACGCCGTGATGGAATAGCG 224808 Query 2411793 CTCGTAC-CAGCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGT 2411851 | |||| | ||| ||| | ||| || || ||| | |||| || ||||| Sbjct 224807 ATAGTACTCTGCG----CGGAAATTGACCAGCTCAATCGGGGCCTTGAGGTTATCGAGAA 224752 Query 2411852 GGGCGTGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCA 2411911 | | || | ||||| | ||| ||| | | |||| || || || |||| || | Sbjct 224751 AGCCATGGATATCGGCCAGGAGAATCTTGATGTGACAGCCCGCTCTTAGGAAGTGCGCGA 224692 Query 2411912 GTTTAAAGATGGGCACAAAGTAGCCCAGATGGGGCTTGCCCGTCG 2411956 |||| | || ||||| | |||||||| |||| || ||||||| Sbjct 224691 GTTTGACTATCGGCACCATGTAGCCCAAATGGATTTTACCCGTCG 224647 >seq1079 Length=322727 Score = 91.5 bits (100), Expect = 2e-12 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || || ||||| ||||| |||||| | | |||||| | ||||||||||| || |||||| Sbjct 155692 GCAGCGAACTATCTCGATATCAAGGCTTTGCTCGATGTCGGGTGCAAGACTGTCGCCAAC 155751 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | ||||| || || || || ||||| || | |||||||| |||||| || ||| Sbjct 155752 ATGATCAAAGGAAAATCTCCTGAGGAGATTAGAAAGACCTTCAACATCCAGAACG 155806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915730377004589