Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3060 109 4e-19 seq2521 102 5e-17 >seq3060 Length=205498 Score = 109 bits (120), Expect = 4e-19 Identities = 155/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| |||||||| ||||| || ||||| || | || |||| Sbjct 122345 AGAACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCT 122286 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || || |||||||||| ||||||||||| | || | ||||||||||| Sbjct 122285 TCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATTCCCTCCTTGTCT 122226 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || ||| || || || | ||||| ||| || ||| || |||| ||| || Sbjct 122225 TGGATCTTTGTCTTCAC--AT--TGTCGATAGTATCACCGGACTCAACCTCAAGGGTGAT 122170 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || || | ||||| ||||| |||||||| Sbjct 122169 GGTCTTGCCAGTCAAAGTCTTGACAAAAATCTGCAT 122134 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||||||||||| ||||| ||||| |||| | || || || || || ||||| || Sbjct 122845 CTCTTTCTGAATGTTGTAGTCTGATAGCGTGCGACCGTCCTCGAGCTGTTTGCCGGCAAA 122786 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| || ||||||||| | || | ||||||||||| | || || ||||||| Sbjct 122785 AATCAAACGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGAATCTTAGTTTTGACGTT 122726 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || |||| || || || ||||| || | |||||| || Sbjct 122725 GTCGATTGTGTCTGAAGACTCTACTTCAAGCGTGATTGTTTTTCCGGTCAAGGTCTTCAC 122666 Query 34966 AAAGATCTGCAT 34977 ||| |||||||| Sbjct 122665 AAAAATCTGCAT 122654 >seq2521 Length=135005 Score = 102 bits (112), Expect = 5e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||| ||| ||||| ||||| |||||||| ||| | || |||| Sbjct 57587 AGGACGAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCATCC 57646 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||| || ||||||||||| | || | || |||||||| Sbjct 57647 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTC 57705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325673544532769