Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq3060 136 3e-27
>seq3060
Length=205498
Score = 136 bits (150), Expect = 3e-27
Identities = 163/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628
|| || || || | ||| || || || ||||| |||||||| || || | | ||||||
Sbjct 122871 AAGCGAAGGACGAGATGCAGTGTAGACTCTTTCTGAATGTTGTAGTCTGATAGCGTGCGA 122812
Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688
|| ||||| |||||||| ||| | ||||| | ||||| || || ||||| |||||
Sbjct 122811 CCGTCCTCGAGCTGTTTGCCGGCAAAAATCAAACGCTGCTGGTCTGGTGGAATTCCCTCC 122752
Query 29689 TTGTCTTGTAATTTTTGTTT-GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747
|||||||| ||| || |||| ||| | || | ||||| ||| ||||||||||| ||
Sbjct 122751 TTGTCTTG-AATCTTAGTTTTGACGTTGTCGATTGTGTCTGAAGACTCTACTTCAAGCGT 122693
Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || ||||| || ||||| ||||||||
Sbjct 122692 GATTGTTTTTCCGGTCAAGGTCTTCACAAAAATCTGCAT 122654
Score = 104 bits (114), Expect = 2e-17
Identities = 165/233 (71%), Gaps = 3/233 (1%)
Strand=Plus/Minus
Query 29555 GTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAAT 29614
|||| || || | ||| | || |||||||| || ||| ||| || || ||||||||||
Sbjct 123112 GTTG-CCGCCGCGCAATCTCAATACCAAATGCAGAGTGCTTTCCTTCTGGATGTTATAAT 123054
Query 29615 CCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCG 29674
| | | || ||| ||| || || || || |||||| | || | || || || || |
Sbjct 123053 CGGAGAGTGTCCGACCATCCTCAAGCTGCTTTCCAGCAAAGATGAGTCGCTGTTGGTCGG 122994
Query 29675 GCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGT 29733
| || ||||| ||||| ||||| |||||| || || || | || | ||||| ||
Sbjct 122993 GTGGGATACCTTCTTTATCTTG-AATTTTCGTCTTAACGTTGTCGATCGTGTCTGACGAC 122935
Query 29734 TCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || | || ||||| ||||| ||||| || |||||||| || |||||
Sbjct 122934 TCGACCTCCAATGTAATAGTCTTGCCGGTTAATGTCTTAACAAAAATTTGCAT 122882
Score = 102 bits (112), Expect = 6e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||| || || ||||| ||||| ||||||||||| | | ||||||
Sbjct 122641 ACGGAGGACAAGATGGAGAGTAGATTCCTTTTGGATGTTATAATCAGAGAGAGTGCGACC 122582
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || |||||||||||||| | ||||| | ||||||||| || || || ||||| ||
Sbjct 122581 ATCCTCAAGTTGTTTGCCAGCGAAAATCAAGCGTTGCTGATCTGGAGGGATGCCCTCCTT 122522
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|| || ||| || | ||| || | || | || || || ||| || || ||||| |
Sbjct 122521 ATCCTG-AATCTTGGTTTTCACGTTATCGATGGTATCGGAGGATTCAACCTCGAGAGTGA 122463
Query 29750 TAGTTTTGCCAGT 29762
|||| || || ||
Sbjct 122462 TAGTCTTTCCCGT 122450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385196425238991
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |