Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_023580.1 Length=57775 Score E Sequences producing significant alignments: (Bits) Value seq4176 190 8e-44 >seq4176 Length=744 Score = 190 bits (210), Expect = 8e-44 Identities = 282/389 (72%), Gaps = 22/389 (6%) Strand=Plus/Plus Query 45314 CCGTTCTCCAATCACTACGAATACACCCCGTCCTACAACGACTTCGGTCACACCGACGAC 45373 |||||| ||| |||||||| ||||| ||| ||||||||||||||| ||||| ||||| Sbjct 3 CCGTTCAGCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGAT 62 Query 45374 AACGCGCATTTCTGGGCGCAAATGGACTACCTCACACCGCAACTGTTGCGCATCCTTGCG 45433 ||| |||||||| ||||| ||||| | || || ||| | ||| | || || ||| Sbjct 63 GACGGGCATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCG 122 Query 45434 CCCGGGCGGATCTACGCCTG---CCACGTCAAAGACCGCATCTTGTTCGGCAATGTCACC 45490 || || ||| | |||||| |||||| || ||||| ||| ||||||| || ||| Sbjct 123 CCGGGCCGGCT---CGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACC 179 Query 45491 GGCGCTGGCGTGCCCACCGTGTCACCATTTCACGCCGAAGCG-ATCTTCCAC---GGCCG 45546 |||| || ||||| ||||| || || |||||| ||| | ||| ||| || Sbjct 180 GGCGAGGGTGTGCCGACCGTCAATCCGTTCCACGCC-AAGTGCATCGAGCACTATATGCG 238 Query 45547 CAAACACGGCTTTGACTACCTCGGCATGATCACCGTTGTCACCGATGTGGTACGGGAAAA 45606 | |||||||| | | | | |||||||||||||| |||||||| || || || || || Sbjct 239 C---CACGGCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAA 295 Query 45607 CAACCAGACGTACCGGTTGGGTTGGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGG 45662 ||||||||| ||||| || | || | ||| || ||| || |||| ||| ||||||| Sbjct 296 CAACCAGACCTACCGCCTG---TCGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGG 351 Query 45663 GCGTTGGCTCCCCGGAATACGTTCTGCTG 45691 || ||| ||| |||||||| |||||| Sbjct 352 GCTGCGGCAGCCCCGAATACGTGCTGCTG 380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184747756876894