Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq650 159 3e-33 seq4720 96.9 3e-14 >seq650 Length=49892 Score = 159 bits (176), Expect = 3e-33 Identities = 881/1388 (63%), Gaps = 21/1388 (2%) Strand=Plus/Minus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 ||||| |||||||| | ||| || ||||| ||||| ||||| || || | | ||||| Sbjct 4896 ATACCGTTGGCATCGACATCGAAAGTGACCTCAATCTGAGGAACACCACGTGGGGCAGGA 4837 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || || | | ||| | || || || || || || ||| | |||||| Sbjct 4836 GGAATGCCAGTAAGTTCGAATTTACCGAGCAAGTTGTTGTCCTTGGTGCGGGTACGTTCA 4777 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT- 281619 || ||| | | || || || ||| || || || | |||| | || | ||| Sbjct 4776 CCTTCGTACACCTGAATCAAGACACCAGGCTGGTTGTCCGCGAAAGTAGAGAA-AGTCTC 4718 Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 ||| || || || || || ||||| | | || | | ||||| | ||||||||| Sbjct 4717 GGACTTCTTGGTTGGGATAGTAGTGTTACGCTTGATGAGAGGAGTCATGACACCACCAGC 4658 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737 ||||| | ||| | || ||||| | |||||| | |||| || | || | | || Sbjct 4657 AGTTTCGATACCCAAGGAGAGAGGGGCGACATCGAGAAGGAGGATTTCGTTGGTCGACTT 4598 Query 281738 TCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 | || | | |||| || ||||| ||||| | ||| || ||||| || ||||| || Sbjct 4597 GGAAGAGGTGTCACCAGACAGGATAGCAGCTTGGACAGCGGCGCCATAAGCGACAGCCTC 4538 Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 281856 ||| || || | | | || | | || || ||||| |||| |||| | | ||| Sbjct 4537 ATCGGGGTTGATGGACTTGTTAGGCTCCTTTCCGTTGAAGAAATCGGAAACCATCT-TCT 4479 Query 281857 T-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 281915 | ||| || ||||||| || || || || || |||||||| || || || || | Sbjct 4478 GGATCTTTGGGATACGAGTAGAACCACCGACCAAGACAATTTCGTGGACGGAGGACTTGT 4419 Query 281916 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTG 281975 | | || | ||| | || || || || || | | | || | ||| Sbjct 4418 CAATCTTGGCATCACGGAGGACACGCTCGACAGGCTCCATGGTGGAACGGAAGAGGTCCT 4359 Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 282033 ||||| ||||| || || | || || || | || || || || || ||||| Sbjct 4358 GGCAAAGCTCTTCAAAGCGGGCACGGGT--GATGGAAGTGTAGAAGTCGATACCCTCGAA 4301 Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093 | ||| |||| ||||| | ||| || | || |||||| || | || |||||||| || Sbjct 4300 AAGAGAGTCAATCTCAATGGAAGTCTGGGCCGCAGAAGAGAGAGTGCGCTTAGCACGCTC 4241 Query 282094 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA--TCTGTTTTATAT 282151 || || || | || | || | ||| || |||| | ||| || | || | Sbjct 4240 GCAAGCAGTTCGAAGACGGCGAAGGGCACGGGC--ATTGCTGGAAAGATCCTTCTTGTGC 4183 Query 282152 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 282211 || | ||| || || | ||| | | ||||| || || || || || ||||| ||| Sbjct 4182 TTGCGCTTAAACTCATTGACAAAGTGGTTGACAAGGCGGTTGTCGAAGTCCTCACCACCC 4123 Query 282212 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 282271 || | ||| | || | || | | |||| ||| | || || |||| | ||| || Sbjct 4122 AAGTGAGTGTCACCAGCAGTGGACTTGACTTCGAAGATACCTTCCTCAATGGTCAAGAGG 4063 Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 282331 | ||||||| || |||||||||| || || || | ||||| ||| || Sbjct 4062 GAAACATCAAAAGTACCACCACCCAAGTCGAAGATCAAAACATTGCGTTCACCTTCAACC 4003 Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || || | |||||| |||| || |||||||| ||||| || || || | | ||| Sbjct 4002 TTCTTGTCCAAACCATAAGCAATGGCGGCAGCAGTGGGTTCGTTGATGATACGAAGCACA 3943 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || ||||| ||||| || ||||| || || ||||| | || |||||||| || || Sbjct 3942 TTGAGACCGGCAATCAGACCGGCATCCTTGGTAGCTTGACGCTGGGAATCGTTGAAGTAG 3883 Query 282452 GCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCCAATATAAGCGCTTGCTGTTTG 282510 ||||||||||| | ||| |||| |||| || | || | |||| || || | Sbjct 3882 GCAGGAACAGTGACAACAGCAT-TGTTGACAGTTCCACCGAGGTAAGATTCGGCAGTCTC 3824 Query 282511 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCA-T 282569 | |||| || | || | ||| ||||| || | ||| |||| | ||||||| ||| Sbjct 3823 TCTCATCTTGGTCAAGACCATCGATGAGATCTCTTCAGGAGTGAACTGCTTGGTCTCACC 3764 Query 282570 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAAT 282629 |||| || | || || || || || | ||| | || || || | | Sbjct 3763 CTTGA-ATTCGATTTGAATGACAGGCTTGCCGCCCTTGTCAATGATCTTGAAGGGGAAGT 3705 Query 282630 ATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATCGTTTTGCA 282688 |||||||| | || || || | || || | | ||| || | ||||| || Sbjct 3704 GCTTCATATCAGCCTGCAC-CTCAGCATCGGCGAATTTACGACCGATAAGACGTTTGGCG 3646 Query 282689 TCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGA 282748 || || | || ||||| ||||| | || |||||| |||||| |||||||| |||||| Sbjct 3645 TCGAAGACGGTGTTGGTAGGATTCATGGCGACTTGATTTTTGGCGGCATCTCCGATCAGA 3586 Query 282749 TGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCA 282808 | || || || || || | ||| | || ||||| || || || || ||||| || || Sbjct 3585 CGCTCGGTATCCGTGAAAGCAACGAACGAGGGAGTAGTTCGGTTGCCCTGATCGTTGGCG 3526 Query 282809 ATAATTTC 282816 || ||||| Sbjct 3525 ATGATTTC 3518 >seq4720 Length=150193 Score = 96.9 bits (106), Expect = 3e-14 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 435132 TGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAAC 435191 ||||||||||||||| | |||||||||||||| ||| | ||| |||| ||| | || || Sbjct 12046 TGAATTTTTCTTCCACGCCATGGCTGGTCGTGAGGGTCTCATTGATACCGCTGTCAAGAC 11987 Query 435192 TGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGA 435239 || || || ||||| |||||| |||| ||||| ||| |||||||| Sbjct 11986 AGCCGAAACCGGTTACATTCAACGAAAGCTTGTTAAGGCTCTTGAAGA 11939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740392236400326