Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_024387.1 Length=43767 Score E Sequences producing significant alignments: (Bits) Value seq3789 105 2e-18 >seq3789 Length=871 Score = 105 bits (116), Expect = 2e-18 Identities = 180/261 (69%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 1640 ATCGGAGATAATTTCCGAATGGATCTCATGCGTCCGCTGTTTGAAGCAGAAGGATTTGAA 1699 ||||||||||| ||| ||||| | || || | ||||||||||| ||||||||| Sbjct 592 ATCGGAGATAACTTCAAGATGGACATTCTGAAGCCATTATTTGAAGCAGAGGGATTTGAA 651 Query 1700 CTGGAGATTATTAGAAATCCACGTGCAGCTCATAGTTTGCTAGCTCCGCGAATTGAAACA 1759 | || |||| || |||||| ||| || | ||||| ||||||| |||| |||| Sbjct 652 GTTGAAGTTATAAGGAATCCAGATGCTGCAAGTGGTTTGTTAGCTCCAAGAATAGAAATT 711 Query 1760 CTATTTGCTAATCATCGTATTGTGTTTGGAGATAATCCGTTAATGCGATGGTATACAAAT 1819 |||| ||| | | | | || ||||||||||| |||||||| |||||| ||||| Sbjct 712 GCTTTTGAAAATGAACAAGTGATATTCGGAGATAATCCTTTAATGCGTTGGTATGCAAAT 771 Query 1820 AATGTTGCAGTGAAAATCAAACCGGATGGAAATAAAGAGTATCTTAAAAAAGACGAGCAT 1879 || || || || || |||| ||||||| |||| || || || || | Sbjct 772 AACGTGCTTGTTAAGCGTCTTCCTAATGGTAATAAAGTTTATCGCAAGAAGGAAGAAGTT 831 Query 1880 AGACGTAAAACTGATGGATTT 1900 | ||||||||||| || ||| Sbjct 832 AAGCGTAAAACTGACGGCTTT 852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139924739083598