Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3934 167 6e-36 >seq3934 Length=413549 Score = 167 bits (184), Expect = 6e-36 Identities = 397/596 (67%), Gaps = 7/596 (1%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 ||||| || ||||||||| | || | | ||| | | || |||||||| || || | Sbjct 409415 TATTTCGGATTCAAAACTTTAGAGAGGTCATATCTGTTGCGAATCAATGGCAAGGTCGCT 409356 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 || ||||| ||||||||| || | ||||||||| |||| |||||||| | || ||| | Sbjct 409355 GAGCGTCCGCAACACATGATTATGCGTGTTGCGGTTGGCATTCATGGCGAAGACATTGAG 409296 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 | || ||| ||| || | | | | || | || |||||| | || || Sbjct 409295 AAGGCGATCGAAACGTATAATCTGATGTCTCAGAAATATTTTACACATGCTTCCCCCACT 409236 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 || || ||||| ||||| | ||| |||| || || ||||| | | || || Sbjct 409235 CTTTTCAACGCGGGAACACCGCAACCACAGATGGCCTCCTGTTTTCTCATTGATATGAAG 409176 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGC--TCTTATTTCTAAAA 110601 || ||| || || ||||| || ||| |||| ||||| |||| ||| ||||| || | Sbjct 409175 GAAGATAGCATCGATGGTATCTACGATACTCT-AAAGAC-CTGCGCTCTGATTTCCAAGA 409118 Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661 |||| || || ||| || | | ||| ||||||| | | || | | || ||| Sbjct 409117 CAGCTGGCGGTATCGGTCTTAATATCCATCGTATTCGCGCGACTGGCTCCTACATTGCAG 409058 Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721 | | || || | || | ||| | || || ||| | | ||||| ||| | || || Sbjct 409057 GAACAAACGGCTCCTCTAACGGAATCGTCCCCATGCTCCGTGTCTTTAACAATACAGCTC 408998 Query 110722 AATATGTGAATCAAGGTGGTAAGAGAAA---TGGCTCATTTGCTATCTATCTCGAACCTT 110778 |||||| | |||||||| || | | |||| | ||||| || ||||| ||||||| Sbjct 408997 GATATGTCGACCAAGGTGGCAACAAACGGCCTGGCGCCTTTGCCATTTATCTTGAACCTT 408938 Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838 |||| || ||||| || || || ||||| || |||||||| || ||| || ||| || Sbjct 408937 GGCACTCCGATATCTTCGAGTTTTTAGATCTCCGTAAAAACCACGGAAAGGAGGAAGTAA 408878 Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTT 110894 |||| |||||| | || ||| | |||| | ||| | |||||||| || ||| Sbjct 408877 GAGCCCGTGATCTCTTCCTTGCTCTTTGGACCCCCGATCTGTTCATGAAGCGGGTT 408822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186739035504811