Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3060 120 2e-22 >seq3060 Length=205498 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || || | || | ||| || || |||||| || |||||||| || || Sbjct 122881 ACCACCGCGTAAGCGAAGGACGAGATGCAGTGTAGACTCTTTCTGAATGTTGTAGTCTGA 122822 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | ||||| ||||||||||||||||||||||| ||| | || Sbjct 122821 TAGCGTGCGACCGTCCTCGAGCTGTTTGCCGGCAAAAATCAAACGCTGCTGGTCTGGTGG 122762 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||| || |||| || | ||| | ||||| || || | Sbjct 122761 AATTCCCTCCTTGTCTTGAATCTT-AGTTTTGACGTTGTCGATTGTGTCTGAAGACTCTA 122703 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| |||||| ||||| || || || || || ||||| ||||||||| Sbjct 122702 CTTCAAGCGTGATTGTTTTTCCGGTCAAGGTCTTCACAAAAATCTGCATA 122653 Score = 109 bits (120), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 || |||||||| |||||||| || || || ||||| |||||||||||||| || | || Sbjct 123093 AATACCAAATGCAGAGTGCTTTCCTTCTGGATGTTATAATCGGAGAGTGTCCGACCATCC 123034 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 || | || ||||| ||||| || | ||||| || || | || | ||||||||| || Sbjct 123033 TCAAGCTGCTTTCCAGCAAAGATGAGTCGCTGTTGGTCGGGTGGGATACCTTCTTTATCT 122974 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 ||||||| || | ||| | ||| | ||||| || || || || | || || || Sbjct 122973 TGAATTTTC-GTCTTAACGTTGTCGATCGTGTCTGACGACTCGACCTCCAATGTAATAGT 122915 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || ||||| || || ||||| || |||||| Sbjct 122914 CTTGCCGGTTAATGTCTTAACAAAAATTTGCATA 122881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328684566505920