Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2228 91.5 1e-13 >seq2228 Length=283306 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 47046 GAGGCGGT-GAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGG 47104 ||||| || ||| || || ||||| || || |||| || || || ||| | || || Sbjct 201671 GAGGCAGTTGAG-ATTGAGAAGGAATTCTTAACTGATGCTCTTCCATGTGCCCTTCTTGG 201729 Query 47105 CATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTG-TTGGTGC 47163 ||||||||| || |||||| ||||||| |||||||| || || | ||| ||| ||| Sbjct 201730 CATGAACGCCAAGCTCATGTGCCAATATATCGAGTTTGTTGCCGACAGACTGCTTGTTGC 201789 Query 47164 AGCTCGGACAACCGAAA-TATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATT 47222 | || |||| ||| | | ||||| || || ||||| |||||| | ||||| Sbjct 201790 --TTTGGGCAACAAAAAGTTCTACAATGCCACCAACCCATTTGACTTTATGGATAACATC 201847 Query 47223 TCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 ||| | | ||||| ||||| || |||||||| || || || || || Sbjct 201848 TCGTTGGCCGGCAAGACCAACTTCTTCGAGAAGCGGGTTGGTGATTA 201894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476582299488360