Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3060 87.8 2e-12 >seq3060 Length=205498 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 25199 ACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAA 25258 || ||||| | ||||| |||| || ||| || |||||| ||||| | || ||| Sbjct 122450 ACGGGAAAGACTATCACTCTCGAGGTTGAATCCTCCGATACCATCGATAACGTGAAAACC 122509 Query 25259 AAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAA 25318 || ||| ||||| ||||| || || || ||||||||| | | |||| || |||||| Sbjct 122510 AAGATTCAGGATAAGGAGGGCATCCCTCCAGATCAGCAACGCTTGATTTTCGCTGGCAAA 122569 Query 25319 CAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCAC 25371 ||||| || |||| | | | | || ||||| || || ||||| ||||| || Sbjct 122570 CAACTTGAGGATGGTCGCACTCTCTCTGATTATAACATCCAAAAGGAATCTAC 122622 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || ||||||||||| || | || || | || ||||| | Sbjct 122882 ATGCAAATTTTTGTTAAGACATTAACCGGCAAGACTATTACATTGGAGGTCGAGTCGTCA 122941 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || |||||| |||||||| ||||| || ||||| || Sbjct 122942 GACACGATCGACAACGTTAAGACGAAAATTCAAGATAAAGAAGGTATCCCACCCGACCAA 123001 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||||||| | | || || || || || |||| | | | || |||||| || Sbjct 123002 CAGCGACTCATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGGACACTCTCCGATTATAAC 123061 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAA 25404 || || || ||| ||| | ||||| || || |||||| | || || || Sbjct 123062 ATCCAGAAGGAAAGCACTCTGCATTTGGTATTGAGATTGCGCGGCGGCAA 123111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445067410588320