Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_026584.1 Length=109871 Score E Sequences producing significant alignments: (Bits) Value seq2797 120 2e-22 seq1359 84.2 2e-11 >seq2797 Length=1861 Score = 120 bits (132), Expect = 2e-22 Identities = 131/172 (76%), Gaps = 3/172 (2%) Strand=Plus/Plus Query 97665 TTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGA 97724 |||| ||||| ||||| |||| || || || || |||||||| |||||||||| || Sbjct 686 TTGGCCTTGATCAGGCCGGTGATCACGTCGACCGAAGGCCGCTGGGTCGCCAGGATCAGG 745 Query 97725 TGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTC 97784 || || ||||| |||||||||||||| || | ||| | ||| | |||| || ||| Sbjct 746 TGGATGCCGGCGGCGCGCGCCTTCTGCGCCAGGCGAGCGATGAGCTCTTCGA--TC-TTC 802 Query 97785 TTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGT 97836 ||| | ||||||| ||||| ||||||||||||| ||| |||||||||| Sbjct 803 TTGCCCACCACCATCATCAGGTCGGCGAGTTCGTCGATCACCACCACGATGT 854 Score = 100 bits (110), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 97947 TCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATC 98006 ||||| |||||||| || ||||| ||||| || | ||| | | |||| |||| Sbjct 1052 TCGGTCACCACCGGTGCCAGCAGGTGCGGGATGCCCTCGTAGACCGACATCTCCAGCATC 1111 Query 98007 TTCGGGTCGATCATGATGAGCTTGAC-CCGATCAGGATT-GGCTCGGTAGAGCATGGAAA 98064 |||||||||||||| | || ||| || | | || ||| ||| |||| || | Sbjct 1112 TTCGGGTCGATCATCAGCAGGCGGACATCG--CGTGCTTCGGCCTTGTAAAGCAGCGACA 1169 Query 98065 CCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGT 98124 | ||||| ||||||| | |||||||| |||||||||| ||| |||||||||| || Sbjct 1170 GGATCATCGCGTTGATGCCGACCGACTTGCCGGATCCGGTGGTGCCGGCCACCAGCACGT 1229 Query 98125 GGGGCATTTTGGCCAGGT 98142 | ||||| |||||||||| Sbjct 1230 GCGGCATCTTGGCCAGGT 1247 >seq1359 Length=2077 Score = 84.2 bits (92), Expect = 2e-11 Identities = 124/175 (71%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 97660 GCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGA 97719 ||| ||| | ||||| | ||| |||| || || || ||||| ||||||||||||| || Sbjct 1831 GCAGGTTCGCCTTGATCACGCCGGTGATGACGTCGACCGAGGGGCGCTGCGTCGCCATGA 1890 Query 97720 CGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTT 97779 ||| || || || || ||||||||||| || |||| ||| || | || |||| Sbjct 1891 TGAGGTGGATGCCCGCCGCGCGCGCCTTTTGCGCGAGGCGCTGGATCAGGAATTCCACTT 1950 Query 97780 CTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGAT 97834 | |||| || |||||| ||||| || || |||||||| | || ||||| Sbjct 1951 C---CTTGCCCGCGGTCATCATCAGGTCCGCAAGCTCGTCGACGATCACGACGAT 2002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351441620993752